BLASTX nr result

ID: Dioscorea21_contig00038063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038063
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266842.2| PREDICTED: ABC transporter C family member 1...    77   1e-12
ref|XP_003564285.1| PREDICTED: ABC transporter C family member 1...    72   4e-11
ref|XP_002297990.1| multidrug resistance protein ABC transporter...    70   2e-10
ref|XP_002331826.1| multidrug resistance protein ABC transporter...    69   4e-10
ref|XP_002267650.2| PREDICTED: ABC transporter C family member 1...    67   1e-09

>ref|XP_002266842.2| PREDICTED: ABC transporter C family member 10-like [Vitis vinifera]
          Length = 1483

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 32/73 (43%), Positives = 49/73 (67%)
 Frame = +2

Query: 5   YLSLGVWMLEEKLKNGTGFFPLHWWLVVLSQGFIWLLMSLVASIRSKQLGEVFIRIWIGF 184
           YLSLG+W+LEEKL+     FPLHWW+++L  GF WL+++L+ S+  + L +   R+   F
Sbjct: 92  YLSLGIWILEEKLRKTHSVFPLHWWILLLFHGFTWLILALIVSLWGRHLSKAPFRVLSIF 151

Query: 185 AGVFAGFLCTSSI 223
           A + AG +C  S+
Sbjct: 152 AFLLAGTICVFSL 164


>ref|XP_003564285.1| PREDICTED: ABC transporter C family member 10-like isoform 1
           [Brachypodium distachyon]
          Length = 1475

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/74 (45%), Positives = 42/74 (56%)
 Frame = +2

Query: 5   YLSLGVWMLEEKLKNGTGFFPLHWWLVVLSQGFIWLLMSLVASIRSKQLGEVFIRIWIGF 184
           YL LG+WML      G   F  HWWLV LSQGF  +L S   SIR + LG  F+R W   
Sbjct: 86  YLGLGLWMLWTNFNQGASVFLTHWWLVTLSQGFGLILTSFAFSIRPRFLGAAFVRFWSVS 145

Query: 185 AGVFAGFLCTSSIL 226
             ++A F+  SS+L
Sbjct: 146 VTIYAAFISCSSVL 159


>ref|XP_002297990.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222845248|gb|EEE82795.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1446

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
 Frame = +2

Query: 5   YLSLGVWMLEEKLKNGTGFFPLHWWLVVLSQGFIWLLMSLVASIR---SKQLGEVFIRIW 175
           YL  G+WM+ EKL       PLH WLV+L QGF WLL++L+ S++   S Q+  V   + 
Sbjct: 59  YLGWGIWMISEKLGRDQTILPLHGWLVILFQGFTWLLVNLLVSLKKVPSPQIAAVKFCLI 118

Query: 176 IGFAGVFAGFLCTSSILG 229
           I F  +F+GFLC SSI G
Sbjct: 119 ITF--LFSGFLCFSSIWG 134


>ref|XP_002331826.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222875064|gb|EEF12195.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1423

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/73 (46%), Positives = 43/73 (58%)
 Frame = +2

Query: 5   YLSLGVWMLEEKLKNGTGFFPLHWWLVVLSQGFIWLLMSLVASIRSKQLGEVFIRIWIGF 184
           YL LG+W+LEEKL+      PL  WLVVL QGF WLL+ L  S+  K L    +R+    
Sbjct: 38  YLCLGIWILEEKLRKNQTVLPLRSWLVVLFQGFTWLLVGLTISLLGKHLQRTPLRLLSIL 97

Query: 185 AGVFAGFLCTSSI 223
           A + AG +C  SI
Sbjct: 98  ASLLAGIVCALSI 110


>ref|XP_002267650.2| PREDICTED: ABC transporter C family member 10-like [Vitis vinifera]
          Length = 1532

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/73 (46%), Positives = 44/73 (60%)
 Frame = +2

Query: 5   YLSLGVWMLEEKLKNGTGFFPLHWWLVVLSQGFIWLLMSLVASIRSKQLGEVFIRIWIGF 184
           YL LGVW+LEE L+      PLHWWL+ L QGF WLL+ L+ S+R + L    +RI    
Sbjct: 142 YLGLGVWILEENLRKTQIVLPLHWWLLPLLQGFTWLLVGLMVSLRGQYLPRSPLRILSIL 201

Query: 185 AGVFAGFLCTSSI 223
           A +F+G     SI
Sbjct: 202 AFLFSGITGVLSI 214


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