BLASTX nr result

ID: Dioscorea21_contig00038058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038058
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002489165.1| hypothetical protein SORBIDRAFT_0015s007030 ...    69   5e-10
gb|ABA98003.1| retrotransposon protein, putative, unclassified [...    68   9e-10
ref|XP_003550922.1| PREDICTED: putative ribonuclease H protein A...    67   2e-09
ref|XP_003526344.1| PREDICTED: uncharacterized protein LOC100799...    67   2e-09
gb|AAU90246.1| hypothetical protein [Oryza sativa Japonica Group]      65   4e-09

>ref|XP_002489165.1| hypothetical protein SORBIDRAFT_0015s007030 [Sorghum bicolor]
            gi|241947177|gb|EES20322.1| hypothetical protein
            SORBIDRAFT_0015s007030 [Sorghum bicolor]
          Length = 933

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 35/97 (36%), Positives = 55/97 (56%)
 Frame = +1

Query: 1    ILNFKVAPFPFTYLGVLISPKRLARVVFNSMIEKISRLCSRWTQSHLSPAAKTILINSTV 180
            I N +V  FPF YLGV +SP R+    +  ++EK  R    W  + LS   +  LI+ST+
Sbjct: 749  IFNCQVGSFPFKYLGVPVSPSRIHVRDWLPIVEKAYRKLDVWKGNSLSIPGRKTLIDSTL 808

Query: 181  MSIPTYQLSVYPIYDTVLQEINRIVRRFFWVKSGNRK 291
             + P YQ+S+Y +  T+  ++++I R FFW     +K
Sbjct: 809  SNAPLYQISIYLLPKTITYKLDKIRRTFFWQGGDTKK 845


>gb|ABA98003.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 583

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/85 (42%), Positives = 50/85 (58%)
 Frame = +1

Query: 19  APFPFTYLGVLISPKRLARVVFNSMIEKISRLCSRWTQSHLSPAAKTILINSTVMSIPTY 198
           A FP TYLG+ ++P RL +V F  + +KI    S W  S L    + I++NS + +IPTY
Sbjct: 295 ASFPLTYLGLPLTPGRLRKVHFQPLQDKIKGRFSGWKPSLLYMGGRRIMVNSVLSAIPTY 354

Query: 199 QLSVYPIYDTVLQEINRIVRRFFWV 273
            L+V       LQEI++  RRF WV
Sbjct: 355 TLTVLKPPKQSLQEIDKARRRFLWV 379


>ref|XP_003550922.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 549

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/89 (39%), Positives = 48/89 (53%)
 Frame = +1

Query: 4   LNFKVAPFPFTYLGVLISPKRLARVVFNSMIEKISRLCSRWTQSHLSPAAKTILINSTVM 183
           LN  +  FPFTYLG+ I        ++  +I K  R  + W Q HLS   + ILINS + 
Sbjct: 146 LNCGLMSFPFTYLGIPIGANPRRCQMWEPLINKCERKLAGWKQRHLSFGGRVILINSVLT 205

Query: 184 SIPTYQLSVYPIYDTVLQEINRIVRRFFW 270
           SIP Y LS + +   V+ +I R+ R F W
Sbjct: 206 SIPIYFLSFFRVPRQVISKITRLQRNFLW 234


>ref|XP_003526344.1| PREDICTED: uncharacterized protein LOC100799415 [Glycine max]
          Length = 3081

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/99 (35%), Positives = 52/99 (52%)
 Frame = +1

Query: 1    ILNFKVAPFPFTYLGVLISPKRLARVVFNSMIEKISRLCSRWTQSHLSPAAKTILINSTV 180
            +LN ++ P PF YLG+ I        +++ ++ K  R  +RW Q HLS   +  LI ST+
Sbjct: 2116 LLNCRILPMPFKYLGIPIGANPRRSELWDPILRKCERKLARWKQRHLSFGGRVTLIQSTL 2175

Query: 181  MSIPTYQLSVYPIYDTVLQEINRIVRRFFWVKSGNRKGI 297
             SIP Y LS + +   V  ++  I RRF W     +K I
Sbjct: 2176 SSIPIYFLSFFKLPAKVADKLIGIQRRFLWGGGSEQKKI 2214


>gb|AAU90246.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 1275

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/97 (29%), Positives = 56/97 (57%)
 Frame = +1

Query: 1    ILNFKVAPFPFTYLGVLISPKRLARVVFNSMIEKISRLCSRWTQSHLSPAAKTILINSTV 180
            +LNF +  FP  YLG+ ISP+++     N ++EK+ +   +W    L+ A + + IN+ +
Sbjct: 1090 MLNFPIGTFPMKYLGLPISPEKILTQDLNFLLEKMEKRLCKWNGRGLTQAGRAVQINACL 1149

Query: 181  MSIPTYQLSVYPIYDTVLQEINRIVRRFFWVKSGNRK 291
             SIP+Y +  Y + + +    + I  R++W  +GN++
Sbjct: 1150 SSIPSYAMGFYHLLEGIQHRFDTIRGRYYW--AGNKQ 1184


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