BLASTX nr result

ID: Dioscorea21_contig00038047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038047
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003563382.1| PREDICTED: uncharacterized protein LOC100830...    59   5e-07
ref|XP_002523657.1| conserved hypothetical protein [Ricinus comm...    57   2e-06
gb|AFK38293.1| unknown [Lotus japonicus]                               55   4e-06

>ref|XP_003563382.1| PREDICTED: uncharacterized protein LOC100830292 [Brachypodium
           distachyon]
          Length = 106

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/74 (47%), Positives = 41/74 (55%), Gaps = 11/74 (14%)
 Frame = -2

Query: 267 GAVLRRGGSPSCSG-----IERFVRKLKKRSKMLCMTSRTPTFHC---QYDPLSYARNFD 112
           GA   R  S S S      + R VR+L++RSKMLC  S   +  C   QYDPLSYARNFD
Sbjct: 11  GASAARSSSSSSSAGCGLALGRLVRRLRRRSKMLCTASSASSSRCCPLQYDPLSYARNFD 70

Query: 111 R---NGFGCASDDD 79
                GFG   D+D
Sbjct: 71  HRGGGGFGAGPDED 84


>ref|XP_002523657.1| conserved hypothetical protein [Ricinus communis]
           gi|223537109|gb|EEF38743.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 108

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 37/105 (35%), Positives = 51/105 (48%), Gaps = 16/105 (15%)
 Frame = -2

Query: 348 MACTVISWCQKRGSTTIS-----DSRRSEVSPGAVLR---------RGGSPSCSGIERFV 211
           MA   + W  K  STT S     ++  S VSP A             G    C G+ + +
Sbjct: 1   MAQMWLLWLPKCISTTTSKIASANNTASTVSPAAATAAASTTMVDDNGQHCRCGGLTKVI 60

Query: 210 RKLKKRSKML--CMTSRTPTFHCQYDPLSYARNFDRNGFGCASDD 82
           +KLK++ +M+     SR  +F C YDPLSY+ NFD +G G   DD
Sbjct: 61  KKLKRQGRMIRAATASRQSSFQCGYDPLSYSLNFDTSGCGSMMDD 105


>gb|AFK38293.1| unknown [Lotus japonicus]
          Length = 133

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 14/96 (14%)
 Frame = -2

Query: 324 CQKRGSTTISDSRRSEVSPGAVLRRGGSPS-----------CSGIERFVRKLKKRSKML- 181
           C K  +TT S + + +  P A +    S +           C  + + VRKLK+RS+   
Sbjct: 8   CSKNTTTTSSTTMKMQHEPAATVPPKSSSAAAAITTSKCHCCCLVTKLVRKLKRRSRSTP 67

Query: 180 --CMTSRTPTFHCQYDPLSYARNFDRNGFGCASDDD 79
                SR  +F C+YDPLSY+ NFD  G G   D+D
Sbjct: 68  RPVSASRQGSFQCRYDPLSYSLNFDTTGCGTLLDED 103


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