BLASTX nr result

ID: Dioscorea21_contig00038037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038037
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39619.3| unnamed protein product [Vitis vinifera]               79   3e-13
ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containi...    79   3e-13
ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containi...    73   2e-11
ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containi...    71   8e-11
gb|AFN53666.1| hypothetical protein [Linum usitatissimum]              71   1e-10

>emb|CBI39619.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/108 (37%), Positives = 67/108 (62%)
 Frame = +1

Query: 4   KLFPQIHAQMLSTGSLNDTXXXXXXXXXXXXXXXXXXDYSRRLLFQIHHPNCFSWNTLIR 183
           K F +I +QM+ TG ++DT                  DYS ++  +I + N F WNT++R
Sbjct: 43  KQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMR 102

Query: 184 AHSRRDSPQWALLLYRLMLASDLVPDNHTFPILLQASALRLCGLEGKQ 327
           A+ + +S + ALLLY+LM+ +++ PDN+T+P+++QA A+RL    GK+
Sbjct: 103 AYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKE 150


>ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/108 (37%), Positives = 67/108 (62%)
 Frame = +1

Query: 4   KLFPQIHAQMLSTGSLNDTXXXXXXXXXXXXXXXXXXDYSRRLLFQIHHPNCFSWNTLIR 183
           K F +I +QM+ TG ++DT                  DYS ++  +I + N F WNT++R
Sbjct: 55  KQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMR 114

Query: 184 AHSRRDSPQWALLLYRLMLASDLVPDNHTFPILLQASALRLCGLEGKQ 327
           A+ + +S + ALLLY+LM+ +++ PDN+T+P+++QA A+RL    GK+
Sbjct: 115 AYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKE 162


>ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 809

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 37/99 (37%), Positives = 56/99 (56%)
 Frame = +1

Query: 31  MLSTGSLNDTXXXXXXXXXXXXXXXXXXDYSRRLLFQIHHPNCFSWNTLIRAHSRRDSPQ 210
           ML TG + +T                  DY+RR+   I + NCF WN +IRA+ + +SP 
Sbjct: 1   MLLTGFIRETYAASRLIKFSTHFPFIHIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPH 60

Query: 211 WALLLYRLMLASDLVPDNHTFPILLQASALRLCGLEGKQ 327
           +A  LY+ ML++ L  DN+T+P+L+QA ++R    E KQ
Sbjct: 61  FAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQ 99


>ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 775

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
 Frame = +1

Query: 118 YSRRLLFQIHHPNCFSWNTLIRAHSR-RDSPQWALLLYRLMLASDLVPDNHTFPILLQAS 294
           YS R+   + +PN F+WNT++RAH   ++SP  ALL Y+L LAS   PD++T+PILLQ  
Sbjct: 56  YSLRIFNHLRNPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCC 115

Query: 295 ALRLCGLEGKQ 327
           A R+   EG+Q
Sbjct: 116 AARVSEFEGRQ 126


>gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
          Length = 850

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 42/108 (38%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
 Frame = +1

Query: 4   KLFPQIHAQMLSTGSLNDTXXXXXXXXXXXXXXXXXXDYSRRLLFQIHHPNCFSWNTLIR 183
           K   QIHAQML T  L+D                   DY+R++  QI  PN +SWN LIR
Sbjct: 153 KQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNILIR 212

Query: 184 AHSRRDSP-QWALLLYRLMLASDLVPDNHTFPILLQASALRLCGLEGK 324
           A +    P Q  L+  R++  S   P+  TFP+L++A A R C L GK
Sbjct: 213 ALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGK 260


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