BLASTX nr result
ID: Dioscorea21_contig00038037
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00038037 (329 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI39619.3| unnamed protein product [Vitis vinifera] 79 3e-13 ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containi... 79 3e-13 ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containi... 73 2e-11 ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containi... 71 8e-11 gb|AFN53666.1| hypothetical protein [Linum usitatissimum] 71 1e-10 >emb|CBI39619.3| unnamed protein product [Vitis vinifera] Length = 640 Score = 79.3 bits (194), Expect = 3e-13 Identities = 40/108 (37%), Positives = 67/108 (62%) Frame = +1 Query: 4 KLFPQIHAQMLSTGSLNDTXXXXXXXXXXXXXXXXXXDYSRRLLFQIHHPNCFSWNTLIR 183 K F +I +QM+ TG ++DT DYS ++ +I + N F WNT++R Sbjct: 43 KQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMR 102 Query: 184 AHSRRDSPQWALLLYRLMLASDLVPDNHTFPILLQASALRLCGLEGKQ 327 A+ + +S + ALLLY+LM+ +++ PDN+T+P+++QA A+RL GK+ Sbjct: 103 AYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKE 150 >ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like [Vitis vinifera] Length = 808 Score = 79.3 bits (194), Expect = 3e-13 Identities = 40/108 (37%), Positives = 67/108 (62%) Frame = +1 Query: 4 KLFPQIHAQMLSTGSLNDTXXXXXXXXXXXXXXXXXXDYSRRLLFQIHHPNCFSWNTLIR 183 K F +I +QM+ TG ++DT DYS ++ +I + N F WNT++R Sbjct: 55 KQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMR 114 Query: 184 AHSRRDSPQWALLLYRLMLASDLVPDNHTFPILLQASALRLCGLEGKQ 327 A+ + +S + ALLLY+LM+ +++ PDN+T+P+++QA A+RL GK+ Sbjct: 115 AYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKE 162 >ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like [Cucumis sativus] Length = 809 Score = 73.2 bits (178), Expect = 2e-11 Identities = 37/99 (37%), Positives = 56/99 (56%) Frame = +1 Query: 31 MLSTGSLNDTXXXXXXXXXXXXXXXXXXDYSRRLLFQIHHPNCFSWNTLIRAHSRRDSPQ 210 ML TG + +T DY+RR+ I + NCF WN +IRA+ + +SP Sbjct: 1 MLLTGFIRETYAASRLIKFSTHFPFIHIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPH 60 Query: 211 WALLLYRLMLASDLVPDNHTFPILLQASALRLCGLEGKQ 327 +A LY+ ML++ L DN+T+P+L+QA ++R E KQ Sbjct: 61 FAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQ 99 >ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like [Glycine max] Length = 775 Score = 71.2 bits (173), Expect = 8e-11 Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 1/71 (1%) Frame = +1 Query: 118 YSRRLLFQIHHPNCFSWNTLIRAHSR-RDSPQWALLLYRLMLASDLVPDNHTFPILLQAS 294 YS R+ + +PN F+WNT++RAH ++SP ALL Y+L LAS PD++T+PILLQ Sbjct: 56 YSLRIFNHLRNPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCC 115 Query: 295 ALRLCGLEGKQ 327 A R+ EG+Q Sbjct: 116 AARVSEFEGRQ 126 >gb|AFN53666.1| hypothetical protein [Linum usitatissimum] Length = 850 Score = 70.9 bits (172), Expect = 1e-10 Identities = 42/108 (38%), Positives = 55/108 (50%), Gaps = 1/108 (0%) Frame = +1 Query: 4 KLFPQIHAQMLSTGSLNDTXXXXXXXXXXXXXXXXXXDYSRRLLFQIHHPNCFSWNTLIR 183 K QIHAQML T L+D DY+R++ QI PN +SWN LIR Sbjct: 153 KQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNILIR 212 Query: 184 AHSRRDSP-QWALLLYRLMLASDLVPDNHTFPILLQASALRLCGLEGK 324 A + P Q L+ R++ S P+ TFP+L++A A R C L GK Sbjct: 213 ALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGK 260