BLASTX nr result

ID: Dioscorea21_contig00038027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038027
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82867.1| hypothetical protein VITISV_015468 [Vitis vinifera]   164   5e-39
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]     162   3e-38
ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g...   162   3e-38
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|...   162   3e-38
gb|AAP43919.1| integrase [Gossypium hirsutum]                         162   3e-38

>emb|CAN82867.1| hypothetical protein VITISV_015468 [Vitis vinifera]
          Length = 321

 Score =  164 bits (416), Expect = 5e-39
 Identities = 76/90 (84%), Positives = 85/90 (94%)
 Frame = -1

Query: 270 RCITCRQAKSRVQPNGLYTPLPISSSPWIDISMDFVLGLPRSKRGRDSIFVVVDRFSKMA 91
           RCITCRQAKSRV P+GLYTPLP+ S+PW+DISMDFVLGLPRS+ GRDSIFVVVDRFSKMA
Sbjct: 176 RCITCRQAKSRVLPHGLYTPLPVPSAPWVDISMDFVLGLPRSRNGRDSIFVVVDRFSKMA 235

Query: 90  HFIPCHKTDDASNIADLFFREIVRLHGMPR 1
           HFI CHKTDDA++IA+LFFREIV LHG+PR
Sbjct: 236 HFISCHKTDDATHIANLFFREIVWLHGVPR 265


>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1713

 Score =  162 bits (410), Expect = 3e-38
 Identities = 73/90 (81%), Positives = 84/90 (93%)
 Frame = -1

Query: 270  RCITCRQAKSRVQPNGLYTPLPISSSPWIDISMDFVLGLPRSKRGRDSIFVVVDRFSKMA 91
            RC+TC +AKS++ P+GLYTPLP+ S+PW DISMDFVLGLPR+KRGRDSIFVVVDRFSKMA
Sbjct: 1240 RCVTCHKAKSKLNPHGLYTPLPVPSAPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMA 1299

Query: 90   HFIPCHKTDDASNIADLFFREIVRLHGMPR 1
            HFIPCHK+DDAS+IA LFF EIVRLHGMP+
Sbjct: 1300 HFIPCHKSDDASHIASLFFSEIVRLHGMPK 1329


>ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]
           gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa
           Japonica Group]
          Length = 681

 Score =  162 bits (410), Expect = 3e-38
 Identities = 73/90 (81%), Positives = 84/90 (93%)
 Frame = -1

Query: 270 RCITCRQAKSRVQPNGLYTPLPISSSPWIDISMDFVLGLPRSKRGRDSIFVVVDRFSKMA 91
           RC+TC +AKS++ P+GLYTPLP+ S+PW DISMDFVLGLPR+KRGRDSIFVVVDRFSKMA
Sbjct: 208 RCVTCHKAKSKLNPHGLYTPLPVPSAPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMA 267

Query: 90  HFIPCHKTDDASNIADLFFREIVRLHGMPR 1
           HFIPCHK+DDAS+IA LFF EIVRLHGMP+
Sbjct: 268 HFIPCHKSDDASHIASLFFSEIVRLHGMPK 297


>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
           gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 681

 Score =  162 bits (410), Expect = 3e-38
 Identities = 73/90 (81%), Positives = 84/90 (93%)
 Frame = -1

Query: 270 RCITCRQAKSRVQPNGLYTPLPISSSPWIDISMDFVLGLPRSKRGRDSIFVVVDRFSKMA 91
           RC+TC +AKS++ P+GLYTPLP+ S+PW DISMDFVLGLPR+KRGRDSIFVVVDRFSKMA
Sbjct: 208 RCVTCHKAKSKLNPHGLYTPLPVPSAPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMA 267

Query: 90  HFIPCHKTDDASNIADLFFREIVRLHGMPR 1
           HFIPCHK+DDAS+IA LFF EIVRLHGMP+
Sbjct: 268 HFIPCHKSDDASHIASLFFSEIVRLHGMPK 297


>gb|AAP43919.1| integrase [Gossypium hirsutum]
          Length = 334

 Score =  162 bits (409), Expect = 3e-38
 Identities = 69/90 (76%), Positives = 87/90 (96%)
 Frame = -1

Query: 270 RCITCRQAKSRVQPNGLYTPLPISSSPWIDISMDFVLGLPRSKRGRDSIFVVVDRFSKMA 91
           +CITC+QAKS+V  +GLYTPLPI +SPW+D+SMDF+LGLPR+K+GRDSIFVVVDRFSKM+
Sbjct: 207 KCITCKQAKSKVMLHGLYTPLPIPTSPWVDLSMDFILGLPRTKKGRDSIFVVVDRFSKMS 266

Query: 90  HFIPCHKTDDASNIADLFFREIVRLHGMPR 1
           HFIPCHKTDDA+++ADLFF+E+VRLHG+P+
Sbjct: 267 HFIPCHKTDDATHVADLFFKEVVRLHGIPK 296


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