BLASTX nr result
ID: Dioscorea21_contig00038024
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00038024 (295 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v... 70 8e-17 emb|CBI24922.3| unnamed protein product [Vitis vinifera] 70 8e-17 ref|XP_004165384.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom... 70 7e-15 ref|XP_004149716.1| PREDICTED: DNA topoisomerase 2-like [Cucumis... 70 7e-15 ref|XP_002314046.1| predicted protein [Populus trichocarpa] gi|2... 68 1e-14 >ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera] Length = 1489 Score = 69.7 bits (169), Expect(2) = 8e-17 Identities = 29/38 (76%), Positives = 37/38 (97%) Frame = +2 Query: 2 EFITPIVKATHRNGRLLAFYTMPEYEAWEKSIEGNANG 115 EFITPIVKATHRNGR+L+FY+MPEYE+W++S+ GNA+G Sbjct: 565 EFITPIVKATHRNGRVLSFYSMPEYESWKESLGGNASG 602 Score = 42.0 bits (97), Expect(2) = 8e-17 Identities = 20/23 (86%), Positives = 21/23 (91%), Gaps = 1/23 (4%) Frame = +1 Query: 229 GLG-STSKEGKEYFSDLGKHQKD 294 GLG STSKEGKEYF DLGKH+KD Sbjct: 610 GLGTSTSKEGKEYFKDLGKHKKD 632 >emb|CBI24922.3| unnamed protein product [Vitis vinifera] Length = 1452 Score = 69.7 bits (169), Expect(2) = 8e-17 Identities = 29/38 (76%), Positives = 37/38 (97%) Frame = +2 Query: 2 EFITPIVKATHRNGRLLAFYTMPEYEAWEKSIEGNANG 115 EFITPIVKATHRNGR+L+FY+MPEYE+W++S+ GNA+G Sbjct: 565 EFITPIVKATHRNGRVLSFYSMPEYESWKESLGGNASG 602 Score = 42.0 bits (97), Expect(2) = 8e-17 Identities = 20/23 (86%), Positives = 21/23 (91%), Gaps = 1/23 (4%) Frame = +1 Query: 229 GLG-STSKEGKEYFSDLGKHQKD 294 GLG STSKEGKEYF DLGKH+KD Sbjct: 610 GLGTSTSKEGKEYFKDLGKHKKD 632 >ref|XP_004165384.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 2-like [Cucumis sativus] Length = 1460 Score = 69.7 bits (169), Expect(2) = 7e-15 Identities = 29/38 (76%), Positives = 36/38 (94%) Frame = +2 Query: 2 EFITPIVKATHRNGRLLAFYTMPEYEAWEKSIEGNANG 115 EFITPIVKATH+NG +L+FYTMPEYEAW++S+ GNA+G Sbjct: 529 EFITPIVKATHKNGTVLSFYTMPEYEAWKESLRGNASG 566 Score = 35.4 bits (80), Expect(2) = 7e-15 Identities = 17/23 (73%), Positives = 19/23 (82%), Gaps = 1/23 (4%) Frame = +1 Query: 229 GLG-STSKEGKEYFSDLGKHQKD 294 GLG STSKEG+EYF L KH+KD Sbjct: 574 GLGTSTSKEGREYFEQLTKHKKD 596 >ref|XP_004149716.1| PREDICTED: DNA topoisomerase 2-like [Cucumis sativus] Length = 1459 Score = 69.7 bits (169), Expect(2) = 7e-15 Identities = 29/38 (76%), Positives = 36/38 (94%) Frame = +2 Query: 2 EFITPIVKATHRNGRLLAFYTMPEYEAWEKSIEGNANG 115 EFITPIVKATH+NG +L+FYTMPEYEAW++S+ GNA+G Sbjct: 529 EFITPIVKATHKNGTVLSFYTMPEYEAWKESLRGNASG 566 Score = 35.4 bits (80), Expect(2) = 7e-15 Identities = 17/23 (73%), Positives = 19/23 (82%), Gaps = 1/23 (4%) Frame = +1 Query: 229 GLG-STSKEGKEYFSDLGKHQKD 294 GLG STSKEG+EYF L KH+KD Sbjct: 574 GLGTSTSKEGREYFEQLTKHKKD 596 >ref|XP_002314046.1| predicted protein [Populus trichocarpa] gi|222850454|gb|EEE88001.1| predicted protein [Populus trichocarpa] Length = 1482 Score = 68.2 bits (165), Expect(2) = 1e-14 Identities = 28/38 (73%), Positives = 36/38 (94%) Frame = +2 Query: 2 EFITPIVKATHRNGRLLAFYTMPEYEAWEKSIEGNANG 115 EFITPIVKATHRNG +L+FY+MPEYE+W++S+ GNA+G Sbjct: 565 EFITPIVKATHRNGTVLSFYSMPEYESWKESLSGNASG 602 Score = 35.8 bits (81), Expect(2) = 1e-14 Identities = 17/23 (73%), Positives = 20/23 (86%), Gaps = 1/23 (4%) Frame = +1 Query: 229 GLG-STSKEGKEYFSDLGKHQKD 294 GLG STSKEGK+YF +L KH+KD Sbjct: 610 GLGTSTSKEGKDYFKNLHKHKKD 632