BLASTX nr result

ID: Dioscorea21_contig00038024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038024
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v...    70   8e-17
emb|CBI24922.3| unnamed protein product [Vitis vinifera]               70   8e-17
ref|XP_004165384.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom...    70   7e-15
ref|XP_004149716.1| PREDICTED: DNA topoisomerase 2-like [Cucumis...    70   7e-15
ref|XP_002314046.1| predicted protein [Populus trichocarpa] gi|2...    68   1e-14

>ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera]
          Length = 1489

 Score = 69.7 bits (169), Expect(2) = 8e-17
 Identities = 29/38 (76%), Positives = 37/38 (97%)
 Frame = +2

Query: 2   EFITPIVKATHRNGRLLAFYTMPEYEAWEKSIEGNANG 115
           EFITPIVKATHRNGR+L+FY+MPEYE+W++S+ GNA+G
Sbjct: 565 EFITPIVKATHRNGRVLSFYSMPEYESWKESLGGNASG 602



 Score = 42.0 bits (97), Expect(2) = 8e-17
 Identities = 20/23 (86%), Positives = 21/23 (91%), Gaps = 1/23 (4%)
 Frame = +1

Query: 229 GLG-STSKEGKEYFSDLGKHQKD 294
           GLG STSKEGKEYF DLGKH+KD
Sbjct: 610 GLGTSTSKEGKEYFKDLGKHKKD 632


>emb|CBI24922.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score = 69.7 bits (169), Expect(2) = 8e-17
 Identities = 29/38 (76%), Positives = 37/38 (97%)
 Frame = +2

Query: 2   EFITPIVKATHRNGRLLAFYTMPEYEAWEKSIEGNANG 115
           EFITPIVKATHRNGR+L+FY+MPEYE+W++S+ GNA+G
Sbjct: 565 EFITPIVKATHRNGRVLSFYSMPEYESWKESLGGNASG 602



 Score = 42.0 bits (97), Expect(2) = 8e-17
 Identities = 20/23 (86%), Positives = 21/23 (91%), Gaps = 1/23 (4%)
 Frame = +1

Query: 229 GLG-STSKEGKEYFSDLGKHQKD 294
           GLG STSKEGKEYF DLGKH+KD
Sbjct: 610 GLGTSTSKEGKEYFKDLGKHKKD 632


>ref|XP_004165384.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 2-like [Cucumis
           sativus]
          Length = 1460

 Score = 69.7 bits (169), Expect(2) = 7e-15
 Identities = 29/38 (76%), Positives = 36/38 (94%)
 Frame = +2

Query: 2   EFITPIVKATHRNGRLLAFYTMPEYEAWEKSIEGNANG 115
           EFITPIVKATH+NG +L+FYTMPEYEAW++S+ GNA+G
Sbjct: 529 EFITPIVKATHKNGTVLSFYTMPEYEAWKESLRGNASG 566



 Score = 35.4 bits (80), Expect(2) = 7e-15
 Identities = 17/23 (73%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
 Frame = +1

Query: 229 GLG-STSKEGKEYFSDLGKHQKD 294
           GLG STSKEG+EYF  L KH+KD
Sbjct: 574 GLGTSTSKEGREYFEQLTKHKKD 596


>ref|XP_004149716.1| PREDICTED: DNA topoisomerase 2-like [Cucumis sativus]
          Length = 1459

 Score = 69.7 bits (169), Expect(2) = 7e-15
 Identities = 29/38 (76%), Positives = 36/38 (94%)
 Frame = +2

Query: 2   EFITPIVKATHRNGRLLAFYTMPEYEAWEKSIEGNANG 115
           EFITPIVKATH+NG +L+FYTMPEYEAW++S+ GNA+G
Sbjct: 529 EFITPIVKATHKNGTVLSFYTMPEYEAWKESLRGNASG 566



 Score = 35.4 bits (80), Expect(2) = 7e-15
 Identities = 17/23 (73%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
 Frame = +1

Query: 229 GLG-STSKEGKEYFSDLGKHQKD 294
           GLG STSKEG+EYF  L KH+KD
Sbjct: 574 GLGTSTSKEGREYFEQLTKHKKD 596


>ref|XP_002314046.1| predicted protein [Populus trichocarpa] gi|222850454|gb|EEE88001.1|
           predicted protein [Populus trichocarpa]
          Length = 1482

 Score = 68.2 bits (165), Expect(2) = 1e-14
 Identities = 28/38 (73%), Positives = 36/38 (94%)
 Frame = +2

Query: 2   EFITPIVKATHRNGRLLAFYTMPEYEAWEKSIEGNANG 115
           EFITPIVKATHRNG +L+FY+MPEYE+W++S+ GNA+G
Sbjct: 565 EFITPIVKATHRNGTVLSFYSMPEYESWKESLSGNASG 602



 Score = 35.8 bits (81), Expect(2) = 1e-14
 Identities = 17/23 (73%), Positives = 20/23 (86%), Gaps = 1/23 (4%)
 Frame = +1

Query: 229 GLG-STSKEGKEYFSDLGKHQKD 294
           GLG STSKEGK+YF +L KH+KD
Sbjct: 610 GLGTSTSKEGKDYFKNLHKHKKD 632


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