BLASTX nr result
ID: Dioscorea21_contig00037991
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00037991
(356 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containi... 179 2e-43
ref|XP_002305120.1| predicted protein [Populus trichocarpa] gi|2... 174 7e-42
gb|AFW62799.1| putative pentatricopeptide repeat family protein ... 172 2e-41
ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containi... 169 2e-40
ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group] g... 168 5e-40
>ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 179 bits (454), Expect = 2e-43
Identities = 81/101 (80%), Positives = 92/101 (91%)
Frame = -1
Query: 305 YEQGKQIHVQALKLGFLCDVFAGNALVNMYAKCGSIDDANLAFSEIPERGVVSWSAMIGG 126
YEQGKQ+HV A+K GF+CD+FA N+LVNMYAKCGSI+DA+ AFSEIP RG+VSWSAMIGG
Sbjct: 502 YEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGG 561
Query: 125 LAQHGHGKEALDLFHKMLDEGVPPNHITLTSVLCACNHAGL 3
AQHGHGKEAL LF++ML +GVPPNHITL SVLCACNHAGL
Sbjct: 562 YAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGL 602
Score = 79.3 bits (194), Expect = 3e-13
Identities = 36/92 (39%), Positives = 59/92 (64%)
Frame = -1
Query: 302 EQGKQIHVQALKLGFLCDVFAGNALVNMYAKCGSIDDANLAFSEIPERGVVSWSAMIGGL 123
E G+Q+H +K+ D+FA LV+MY+KC +DDA A+ +P++ +++W+A+I G
Sbjct: 301 ELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGY 360
Query: 122 AQHGHGKEALDLFHKMLDEGVPPNHITLTSVL 27
+Q G +A+ LF KM E + N TL++VL
Sbjct: 361 SQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVL 392
Score = 78.6 bits (192), Expect = 5e-13
Identities = 42/98 (42%), Positives = 58/98 (59%)
Frame = -1
Query: 296 GKQIHVQALKLGFLCDVFAGNALVNMYAKCGSIDDANLAFSEIPERGVVSWSAMIGGLAQ 117
G+++H A+ GF D F N LV MYAKCG +DD+ F I ER VVSW+A+ Q
Sbjct: 101 GRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQ 160
Query: 116 HGHGKEALDLFHKMLDEGVPPNHITLTSVLCACNHAGL 3
EA+ LF +M+ G+ PN +++ +L AC AGL
Sbjct: 161 SELCGEAVGLFKEMVRSGIMPNEFSISIILNAC--AGL 196
Score = 75.9 bits (185), Expect = 3e-12
Identities = 42/97 (43%), Positives = 54/97 (55%)
Frame = -1
Query: 296 GKQIHVQALKLGFLCDVFAGNALVNMYAKCGSIDDANLAFSEIPERGVVSWSAMIGGLAQ 117
G++IH LK+G D F+ NALV+MY+K G I+ A F +I VVSW+A+I G
Sbjct: 202 GRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVL 261
Query: 116 HGHGKEALDLFHKMLDEGVPPNHITLTSVLCACNHAG 6
H AL L +M G PN TL+S L AC G
Sbjct: 262 HDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMG 298
Score = 69.3 bits (168), Expect = 3e-10
Identities = 34/92 (36%), Positives = 56/92 (60%)
Frame = -1
Query: 293 KQIHVQALKLGFLCDVFAGNALVNMYAKCGSIDDANLAFSEIPERGVVSWSAMIGGLAQH 114
KQIH ++K G D + N+L++ Y KC ID+A+ F E +V++++MI +Q+
Sbjct: 405 KQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQY 464
Query: 113 GHGKEALDLFHKMLDEGVPPNHITLTSVLCAC 18
G G+EAL L+ +M D + P+ +S+L AC
Sbjct: 465 GDGEEALKLYLQMQDADIKPDPFICSSLLNAC 496
Score = 65.1 bits (157), Expect = 6e-09
Identities = 36/92 (39%), Positives = 50/92 (54%)
Frame = -1
Query: 290 QIHVQALKLGFLCDVFAGNALVNMYAKCGSIDDANLAFSEIPERGVVSWSAMIGGLAQHG 111
++H +K GF D N LV +Y+KC A E E VVSWS+++ G Q+G
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61
Query: 110 HGKEALDLFHKMLDEGVPPNHITLTSVLCACN 15
+EAL +F++M GV N T SVL AC+
Sbjct: 62 FVEEALLVFNEMCLLGVKCNEFTFPSVLKACS 93
>ref|XP_002305120.1| predicted protein [Populus trichocarpa] gi|222848084|gb|EEE85631.1|
predicted protein [Populus trichocarpa]
Length = 786
Score = 174 bits (441), Expect = 7e-42
Identities = 84/118 (71%), Positives = 94/118 (79%)
Frame = -1
Query: 356 DSYVYXXXXXXXXXXXAYEQGKQIHVQALKLGFLCDVFAGNALVNMYAKCGSIDDANLAF 177
DS+V AYEQGKQ+HV LK GF+ D+FAGN+LVNMYAKCGSI+DA+ AF
Sbjct: 413 DSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAF 472
Query: 176 SEIPERGVVSWSAMIGGLAQHGHGKEALDLFHKMLDEGVPPNHITLTSVLCACNHAGL 3
S IP RG+VSWSAMIGGLAQHG+GKEAL LF +ML GVPPNHITL SVLCACNHAGL
Sbjct: 473 SRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGL 530
Score = 87.8 bits (216), Expect = 8e-16
Identities = 43/94 (45%), Positives = 61/94 (64%)
Frame = -1
Query: 299 QGKQIHVQALKLGFLCDVFAGNALVNMYAKCGSIDDANLAFSEIPERGVVSWSAMIGGLA 120
QG++IH +KLG+ D F+ NALV+MYAK G ++DA+ F EI + +VSW+A+I G
Sbjct: 129 QGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCV 188
Query: 119 QHGHGKEALDLFHKMLDEGVPPNHITLTSVLCAC 18
H + AL+L +M G+ PN TL+S L AC
Sbjct: 189 LHEYHHRALELLREMNKSGMCPNMFTLSSALKAC 222
Score = 81.3 bits (199), Expect = 8e-14
Identities = 39/92 (42%), Positives = 59/92 (64%)
Frame = -1
Query: 302 EQGKQIHVQALKLGFLCDVFAGNALVNMYAKCGSIDDANLAFSEIPERGVVSWSAMIGGL 123
E G+Q+H +K+ D F G L++MY+KC S+DDA L F +PER +++W+A+I G
Sbjct: 229 ELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGH 288
Query: 122 AQHGHGKEALDLFHKMLDEGVPPNHITLTSVL 27
+Q+ +EA LF M EG+ N TL++VL
Sbjct: 289 SQNEEDEEAASLFPLMHTEGIGFNQTTLSTVL 320
Score = 80.1 bits (196), Expect = 2e-13
Identities = 39/93 (41%), Positives = 53/93 (56%)
Frame = -1
Query: 296 GKQIHVQALKLGFLCDVFAGNALVNMYAKCGSIDDANLAFSEIPERGVVSWSAMIGGLAQ 117
GKQ+H + GF D F N+LV +YAKCG DA F IP+R VVSW+A+
Sbjct: 29 GKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAIPDRSVVSWNALFSCYVH 88
Query: 116 HGHGKEALDLFHKMLDEGVPPNHITLTSVLCAC 18
EA+ LFH M+ G+ PN +L+S++ C
Sbjct: 89 SDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVC 121
Score = 75.9 bits (185), Expect = 3e-12
Identities = 36/92 (39%), Positives = 57/92 (61%)
Frame = -1
Query: 293 KQIHVQALKLGFLCDVFAGNALVNMYAKCGSIDDANLAFSEIPERGVVSWSAMIGGLAQH 114
+QIH +LK GF D + N+L++ Y KCG ++DA F E P +V +++++ AQ
Sbjct: 333 RQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQD 392
Query: 113 GHGKEALDLFHKMLDEGVPPNHITLTSVLCAC 18
G G+EAL L+ +M D G+ P+ +S+L AC
Sbjct: 393 GQGEEALRLYLEMQDRGIKPDSFVCSSLLNAC 424
>gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 172 bits (437), Expect = 2e-41
Identities = 84/118 (71%), Positives = 93/118 (78%)
Frame = -1
Query: 356 DSYVYXXXXXXXXXXXAYEQGKQIHVQALKLGFLCDVFAGNALVNMYAKCGSIDDANLAF 177
DS+V AYEQGKQ+H +K F DVFAGNALV YAKCGSI+DA++AF
Sbjct: 509 DSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAF 568
Query: 176 SEIPERGVVSWSAMIGGLAQHGHGKEALDLFHKMLDEGVPPNHITLTSVLCACNHAGL 3
S +PERG+VSWSAMIGGLAQHGHGK ALDLFH+MLDEGV PNHITLTSVL ACNHAGL
Sbjct: 569 SGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGL 626
Score = 92.0 bits (227), Expect = 4e-17
Identities = 46/99 (46%), Positives = 61/99 (61%)
Frame = -1
Query: 302 EQGKQIHVQALKLGFLCDVFAGNALVNMYAKCGSIDDANLAFSEIPERGVVSWSAMIGGL 123
E G+Q+H ++ G+ DVF NALV+MY+K G I+ A F ++P VVSW+A I G
Sbjct: 222 EAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGC 281
Query: 122 AQHGHGKEALDLFHKMLDEGVPPNHITLTSVLCACNHAG 6
HGH AL+L +M G+ PN TL+SVL AC AG
Sbjct: 282 VTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAG 320
Score = 70.1 bits (170), Expect = 2e-10
Identities = 35/92 (38%), Positives = 55/92 (59%)
Frame = -1
Query: 293 KQIHVQALKLGFLCDVFAGNALVNMYAKCGSIDDANLAFSEIPERGVVSWSAMIGGLAQH 114
+Q+H A K+G L D N L++ Y KCG +D A F E ++S + M+ L+Q
Sbjct: 429 RQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQC 488
Query: 113 GHGKEALDLFHKMLDEGVPPNHITLTSVLCAC 18
HG++A+ LF +ML +G+ P+ L+S+L AC
Sbjct: 489 DHGEDAIKLFVQMLRKGLEPDSFVLSSLLNAC 520
Score = 68.6 bits (166), Expect = 5e-10
Identities = 39/95 (41%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Frame = -1
Query: 305 YEQGKQIHVQALKLGFLCDVFAGNALVNMYAKCGSIDDANLAFSEIPERGVVSWSAMIGG 126
+ G+QIH +K D F LV+MYAK G +DDA F +P R ++ W+A+I G
Sbjct: 322 FNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISG 381
Query: 125 LAQHGHGKEALDLFHKMLDEG--VPPNHITLTSVL 27
+ G E L LFH+M EG + N TL SVL
Sbjct: 382 CSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVL 416
Score = 60.8 bits (146), Expect = 1e-07
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Frame = -1
Query: 296 GKQIHVQALKLGFLCDVFAGNALVNMYAKCGSIDDANLAFSEI----PERGVVSWSAMIG 129
G Q+H A+ + DVF NALV +Y G +D+A F E ER VSW+ MI
Sbjct: 119 GAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMIS 178
Query: 128 GLAQHGHGKEALDLFHKMLDEGVPPNHITLTSVLCAC 18
++ +A+ +F +M+ G PN + V+ AC
Sbjct: 179 AYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNAC 215
>ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 169 bits (429), Expect = 2e-40
Identities = 77/101 (76%), Positives = 89/101 (88%)
Frame = -1
Query: 305 YEQGKQIHVQALKLGFLCDVFAGNALVNMYAKCGSIDDANLAFSEIPERGVVSWSAMIGG 126
YEQGKQ+H +K F+ DVFAGNALV YAKCGSI+DA+LAFS +PE+GVVSWSAMIGG
Sbjct: 521 YEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGG 580
Query: 125 LAQHGHGKEALDLFHKMLDEGVPPNHITLTSVLCACNHAGL 3
LAQHGHGK ALD+FH+M+DE + PNHIT+TSVLCACNHAGL
Sbjct: 581 LAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGL 621
Score = 93.2 bits (230), Expect = 2e-17
Identities = 44/99 (44%), Positives = 63/99 (63%)
Frame = -1
Query: 302 EQGKQIHVQALKLGFLCDVFAGNALVNMYAKCGSIDDANLAFSEIPERGVVSWSAMIGGL 123
E G+++H ++ G+ DVF NALV+MY+K G I A + F ++PE VVSW+A I G
Sbjct: 219 EAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGC 278
Query: 122 AQHGHGKEALDLFHKMLDEGVPPNHITLTSVLCACNHAG 6
HGH + AL+L +M G+ PN TL+S+L AC +G
Sbjct: 279 VLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSG 317
Score = 68.9 bits (167), Expect = 4e-10
Identities = 34/92 (36%), Positives = 57/92 (61%)
Frame = -1
Query: 293 KQIHVQALKLGFLCDVFAGNALVNMYAKCGSIDDANLAFSEIPERGVVSWSAMIGGLAQH 114
+Q+H A KLGFL D N L++ Y KC ++ A F + ++++++MI L+Q
Sbjct: 424 RQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQC 483
Query: 113 GHGKEALDLFHKMLDEGVPPNHITLTSVLCAC 18
HG++A+ LF +ML +G+ P+ L+S+L AC
Sbjct: 484 DHGEDAIKLFMEMLRKGLDPDPFVLSSLLNAC 515
Score = 68.6 bits (166), Expect = 5e-10
Identities = 38/93 (40%), Positives = 51/93 (54%)
Frame = -1
Query: 305 YEQGKQIHVQALKLGFLCDVFAGNALVNMYAKCGSIDDANLAFSEIPERGVVSWSAMIGG 126
+ G+QIH +K D + LV+MYAK G +DDA F IP+R +V W+A+I G
Sbjct: 319 FNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISG 378
Query: 125 LAQHGHGKEALDLFHKMLDEGVPPNHITLTSVL 27
+ EAL LF +M EG N TL +VL
Sbjct: 379 CSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVL 411
Score = 63.2 bits (152), Expect = 2e-08
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Frame = -1
Query: 296 GKQIHVQALKLGFLCDVFAGNALVNMYAKCGSIDDANLAFSEIP-ERGVVSWSAMIGGLA 120
G Q+H A+ G D+F NALV MY G +D+A + F E ER VSW+ ++
Sbjct: 119 GTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYV 178
Query: 119 QHGHGKEALDLFHKMLDEGVPPNHITLTSVLCAC 18
++ A+ +F +M+ GV PN + V+ AC
Sbjct: 179 KNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNAC 212
>ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|215768699|dbj|BAH00928.1| unnamed protein
product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa
Japonica Group]
Length = 877
Score = 168 bits (425), Expect = 5e-40
Identities = 77/101 (76%), Positives = 87/101 (86%)
Frame = -1
Query: 305 YEQGKQIHVQALKLGFLCDVFAGNALVNMYAKCGSIDDANLAFSEIPERGVVSWSAMIGG 126
YEQGKQ+H +K F+ D FAGNALV YAKCGSI+DA LAFS +PERGVVSWSAMIGG
Sbjct: 521 YEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGG 580
Query: 125 LAQHGHGKEALDLFHKMLDEGVPPNHITLTSVLCACNHAGL 3
LAQHGHGK AL+LF +M+DEG+ PNHIT+TSVLCACNHAGL
Sbjct: 581 LAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGL 621
Score = 93.6 bits (231), Expect = 2e-17
Identities = 43/99 (43%), Positives = 66/99 (66%)
Frame = -1
Query: 302 EQGKQIHVQALKLGFLCDVFAGNALVNMYAKCGSIDDANLAFSEIPERGVVSWSAMIGGL 123
E G+Q+H +++G+ DVF NALV+MY K G +D A++ F ++P+ VVSW+A+I G
Sbjct: 219 EAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGC 278
Query: 122 AQHGHGKEALDLFHKMLDEGVPPNHITLTSVLCACNHAG 6
+GH A++L +M G+ PN TL+S+L AC+ AG
Sbjct: 279 VLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAG 317
Score = 75.9 bits (185), Expect = 3e-12
Identities = 35/92 (38%), Positives = 57/92 (61%)
Frame = -1
Query: 293 KQIHVQALKLGFLCDVFAGNALVNMYAKCGSIDDANLAFSEIPERGVVSWSAMIGGLAQH 114
+Q+H A+K+GF+ D N L++ Y KC + DAN F E +++ ++MI L+Q
Sbjct: 424 RQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQC 483
Query: 113 GHGKEALDLFHKMLDEGVPPNHITLTSVLCAC 18
HG+ A+ LF +ML +G+ P+ L+S+L AC
Sbjct: 484 DHGEGAIKLFMEMLRKGLEPDPFVLSSLLNAC 515
Score = 66.6 bits (161), Expect = 2e-09
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Frame = -1
Query: 296 GKQIHVQALKLGFLCDVFAGNALVNMYAKCGSIDDANLAFSEI-PERGVVSWSAMIGGLA 120
G Q+H A+ GF DVF NALV MY G +DDA F+E ER VSW+ ++
Sbjct: 119 GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYV 178
Query: 119 QHGHGKEALDLFHKMLDEGVPPNHITLTSVLCAC 18
++ +A+ +F +M+ G+ P + V+ AC
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNAC 212
Score = 60.5 bits (145), Expect = 1e-07
Identities = 34/93 (36%), Positives = 52/93 (55%)
Frame = -1
Query: 305 YEQGKQIHVQALKLGFLCDVFAGNALVNMYAKCGSIDDANLAFSEIPERGVVSWSAMIGG 126
++ G+QIH +K D + G LV+MYAK +DDA F + R ++ +A+I G
Sbjct: 319 FDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISG 378
Query: 125 LAQHGHGKEALDLFHKMLDEGVPPNHITLTSVL 27
+ G EAL LF+++ EG+ N TL +VL
Sbjct: 379 CSHGGRHDEALSLFYELRKEGLGVNRTTLAAVL 411