BLASTX nr result

ID: Dioscorea21_contig00037987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037987
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002463397.1| hypothetical protein SORBIDRAFT_02g043040 [S...   187   1e-45
gb|EEE67827.1| hypothetical protein OsJ_25598 [Oryza sativa Japo...   186   2e-45
gb|EEC82693.1| hypothetical protein OsI_27351 [Oryza sativa Indi...   185   3e-45
tpg|DAA64140.1| TPA: hypothetical protein ZEAMMB73_955502 [Zea m...   182   2e-44
ref|XP_002329202.1| chromatin remodeling complex subunit [Populu...   176   2e-42

>ref|XP_002463397.1| hypothetical protein SORBIDRAFT_02g043040 [Sorghum bicolor]
           gi|241926774|gb|EER99918.1| hypothetical protein
           SORBIDRAFT_02g043040 [Sorghum bicolor]
          Length = 1475

 Score =  187 bits (474), Expect = 1e-45
 Identities = 94/150 (62%), Positives = 111/150 (74%), Gaps = 1/150 (0%)
 Frame = -3

Query: 448 FLEKHSRMFYNPFNGNVSLHPESSKSLISGGILADEMGLGKTVELLACIFAHRMPSLKDG 269
           F+ K+SRMFYNPFNGN+SL PE S   +SGGILADEMGLGKTVELLACIFAHR P   D 
Sbjct: 320 FIHKNSRMFYNPFNGNISLQPEPSPPYVSGGILADEMGLGKTVELLACIFAHRRPISLDF 379

Query: 268 IIPSSNDSQYSGGQIKRQKRDRVECICGAATDSSKYEGLWVQCDVCDAWQHANCVGYKPK 89
            + S N ++    QIKRQK +RVECICGAA++SS Y GLWVQCD+CDAWQHA+CVGY PK
Sbjct: 380 SV-SQNKTEMD--QIKRQKVERVECICGAASESSAYMGLWVQCDICDAWQHADCVGYSPK 436

Query: 88  KKHSVTDEVRNLKGDNKVLT-RSSMKRKNK 2
           K     D   ++   NK  T +S ++RK K
Sbjct: 437 KDILFDDTTEDVASTNKKSTMKSGIRRKKK 466


>gb|EEE67827.1| hypothetical protein OsJ_25598 [Oryza sativa Japonica Group]
          Length = 1663

 Score =  186 bits (471), Expect = 2e-45
 Identities = 89/149 (59%), Positives = 109/149 (73%)
 Frame = -3

Query: 448 FLEKHSRMFYNPFNGNVSLHPESSKSLISGGILADEMGLGKTVELLACIFAHRMPSLKDG 269
           F+ K SRMFYNPFNGNVS+HPE S   +SGGILADEMGLGKTVELLACIFAHR P   D 
Sbjct: 326 FMHKKSRMFYNPFNGNVSMHPEPSPPYVSGGILADEMGLGKTVELLACIFAHRRPYSADC 385

Query: 268 IIPSSNDSQYSGGQIKRQKRDRVECICGAATDSSKYEGLWVQCDVCDAWQHANCVGYKPK 89
            + S+        QIKR KR+RVECICGAA+ +S Y+G+W+QCD+CDAWQHA+CVGY PK
Sbjct: 386 SVSSNIK---GADQIKRHKRERVECICGAASVTSAYQGIWIQCDICDAWQHASCVGYSPK 442

Query: 88  KKHSVTDEVRNLKGDNKVLTRSSMKRKNK 2
           ++  V D+  +   +N+  T  S  R+ K
Sbjct: 443 EEMHVDDDDGDEASNNEKGTLKSKNRRKK 471


>gb|EEC82693.1| hypothetical protein OsI_27351 [Oryza sativa Indica Group]
          Length = 1547

 Score =  185 bits (470), Expect = 3e-45
 Identities = 88/149 (59%), Positives = 112/149 (75%)
 Frame = -3

Query: 448 FLEKHSRMFYNPFNGNVSLHPESSKSLISGGILADEMGLGKTVELLACIFAHRMPSLKDG 269
           F+ K SRMFYNPFNGNVS+HPE S   +SGGILADEMGLGKTVELLACIFAHR P   D 
Sbjct: 326 FMHKKSRMFYNPFNGNVSMHPEPSPPYVSGGILADEMGLGKTVELLACIFAHRRPYSADC 385

Query: 268 IIPSSNDSQYSGGQIKRQKRDRVECICGAATDSSKYEGLWVQCDVCDAWQHANCVGYKPK 89
            + S+        QIKR KR+RVECICGAA+ +S Y+G+W+QCD+CDAWQHA+CVGY PK
Sbjct: 386 SVSSNIK---GADQIKRHKRERVECICGAASVTSAYQGIWIQCDICDAWQHASCVGYSPK 442

Query: 88  KKHSVTDEVRNLKGDNKVLTRSSMKRKNK 2
           ++  V D+  ++  +N+   + ++K KN+
Sbjct: 443 EEMHVDDDDGDVASNNE---KGTLKPKNR 468


>tpg|DAA64140.1| TPA: hypothetical protein ZEAMMB73_955502 [Zea mays]
          Length = 597

 Score =  182 bits (463), Expect = 2e-44
 Identities = 92/151 (60%), Positives = 108/151 (71%), Gaps = 2/151 (1%)
 Frame = -3

Query: 448 FLEKHSRMFYNPFNGNVSLHPESSKSLISGGILADEMGLGKTVELLACIFAHRMP-SLKD 272
           F+ K+SRMFYNPFNGN+S  PE S   ISGGILADEMGLGKTVELLACIFAHR P SL  
Sbjct: 319 FVHKNSRMFYNPFNGNISSQPEPSPPYISGGILADEMGLGKTVELLACIFAHRRPISLDF 378

Query: 271 GIIPSSNDSQYSGGQIKRQKRDRVECICGAATDSSKYEGLWVQCDVCDAWQHANCVGYKP 92
            +  +  +      QIKRQK +RVECICGAA++SS Y GLWVQCD+CDAWQHA+CVGY P
Sbjct: 379 SVFQNKTEMD----QIKRQKVERVECICGAASESSAYTGLWVQCDICDAWQHADCVGYSP 434

Query: 91  KKKHSVTDEVRNLKGDNKVLT-RSSMKRKNK 2
           K+     D   ++   NK  T +S  +RK K
Sbjct: 435 KRNILFADTTEDVVSTNKKSTMKSGFRRKKK 465


>ref|XP_002329202.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222870983|gb|EEF08114.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1320

 Score =  176 bits (445), Expect = 2e-42
 Identities = 85/135 (62%), Positives = 102/135 (75%), Gaps = 4/135 (2%)
 Frame = -3

Query: 448 FLEKHSRMFYNPFNGNVSLHPESSKSLISGGILADEMGLGKTVELLACIFAHRMPSLKDG 269
           FL+  S+MFYNPF+GNVS HPE S   +SGGILADEMGLGKTVELLACI AHR  +  DG
Sbjct: 333 FLDTCSKMFYNPFSGNVSFHPEFSPPYVSGGILADEMGLGKTVELLACILAHRKSTSDDG 392

Query: 268 --IIPSSNDSQYSGGQIKRQKRDRVECICGAATDSSKYEGLWVQCDVCDAWQHANCVGYK 95
             + P+  ++      +KR KR+RVEC+CGA +DS KY GLWVQCD+CDAWQHA+CVGY 
Sbjct: 393 SVVAPTWQNTGNQKINLKRLKRERVECVCGAVSDSYKYRGLWVQCDICDAWQHADCVGYS 452

Query: 94  P--KKKHSVTDEVRN 56
           P  KKK SV DE ++
Sbjct: 453 PRGKKKMSVDDEQKH 467


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