BLASTX nr result

ID: Dioscorea21_contig00037966 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037966
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284242.2| PREDICTED: BTB/POZ domain-containing protein...    56   3e-06
ref|XP_002303390.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
emb|CAN71562.1| hypothetical protein VITISV_007563 [Vitis vinifera]    56   3e-06
ref|XP_002533158.1| Root phototropism protein, putative [Ricinus...    56   3e-06

>ref|XP_002284242.2| PREDICTED: BTB/POZ domain-containing protein At5g67385-like isoform
           1 [Vitis vinifera]
          Length = 636

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/56 (51%), Positives = 37/56 (66%)
 Frame = +1

Query: 28  NESTSSDRPPLVKKSFLSSVTKKLSRLYLFXXXXXXXXXXGKTRRKPPKDRRHSIS 195
           N   S+D+PPL +KSF++SV+K+L RLY F          GK R KP +DRRHSIS
Sbjct: 582 NTPPSADKPPLPRKSFMNSVSKRLGRLYPF-VRADGVAPDGKARTKPSRDRRHSIS 636


>ref|XP_002303390.1| predicted protein [Populus trichocarpa] gi|222840822|gb|EEE78369.1|
           predicted protein [Populus trichocarpa]
          Length = 256

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
 Frame = +1

Query: 1   VKDIEQP---SGNESTSSDRPPLVKKSFLSSVTKKLSRLYLFXXXXXXXXXXGKTRRKPP 171
           +K+IE+    S   S S+D+PPL +KSF++SV+KKL R+  F           K R +P 
Sbjct: 189 MKEIERATVVSTTSSPSADKPPLPRKSFINSVSKKLGRINPFVRADGFPLSNTKARTRPS 248

Query: 172 KDRRHSIS 195
           KDRRHSIS
Sbjct: 249 KDRRHSIS 256


>emb|CAN71562.1| hypothetical protein VITISV_007563 [Vitis vinifera]
          Length = 621

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/56 (51%), Positives = 37/56 (66%)
 Frame = +1

Query: 28  NESTSSDRPPLVKKSFLSSVTKKLSRLYLFXXXXXXXXXXGKTRRKPPKDRRHSIS 195
           N   S+D+PPL +KSF++SV+K+L RLY F          GK R KP +DRRHSIS
Sbjct: 567 NTPPSADKPPLPRKSFMNSVSKRLGRLYPF-VRADGVAPDGKARTKPSRDRRHSIS 621


>ref|XP_002533158.1| Root phototropism protein, putative [Ricinus communis]
           gi|223527030|gb|EEF29217.1| Root phototropism protein,
           putative [Ricinus communis]
          Length = 621

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 9/74 (12%)
 Frame = +1

Query: 1   VKDIEQPSGNESTSS---------DRPPLVKKSFLSSVTKKLSRLYLFXXXXXXXXXXGK 153
           +K+IE+  G  S +S         D+PPL +KSF++SV+KKL RLY F           K
Sbjct: 550 LKEIEKSGGGRSVTSSPALNSPSADKPPLPRKSFINSVSKKLGRLYPF--VRGEGDSFAK 607

Query: 154 TRRKPPKDRRHSIS 195
            R KP K+RRHSIS
Sbjct: 608 ARAKPSKNRRHSIS 621


Top