BLASTX nr result

ID: Dioscorea21_contig00037944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037944
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635354.1| PREDICTED: uncharacterized protein LOC100854...   173   1e-41
ref|XP_002273299.2| PREDICTED: uncharacterized protein LOC100250...   166   1e-39
gb|AAO23078.1| polyprotein [Glycine max]                              139   2e-31
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...   138   4e-31
emb|CAN73669.1| hypothetical protein VITISV_003711 [Vitis vinifera]   137   9e-31

>ref|XP_003635354.1| PREDICTED: uncharacterized protein LOC100854728 [Vitis vinifera]
          Length = 2807

 Score =  173 bits (439), Expect = 1e-41
 Identities = 84/149 (56%), Positives = 105/149 (70%)
 Frame = +1

Query: 4    RSQHRMEQKANAHRRELELKIGDQVLVRLQPYRQSTIAQRHSVKLSPRYYGPFPILERIG 183
            ++QHRM QKANAHRR+L+L++GD VLVRLQPYRQ+T A R   KL+ RYYGP+ +LERIG
Sbjct: 1154 QAQHRMTQKANAHRRDLQLEVGDMVLVRLQPYRQTTAAHRPYQKLAKRYYGPYQVLERIG 1213

Query: 184  PVAYKLGLPPASRVHPVFHISALKLFKGSAMTQACPLPSNADDTEFISKPVAICATRITF 363
             VAY+L LP   ++HPVFHISALK F+G    +  PLP+       +  P AICA R   
Sbjct: 1214 AVAYRLALPSGCKIHPVFHISALKPFRGPVPDKVYPLPTATMGIHPLLVPAAICAVRTIL 1273

Query: 364  QKGKPVHQILVRWQHVPPEGATWENFEEF 450
            ++GK V QILV+W    PE ATWE+F  F
Sbjct: 1274 RQGKEVQQILVQWTASDPENATWEDFVAF 1302


>ref|XP_002273299.2| PREDICTED: uncharacterized protein LOC100250138 [Vitis vinifera]
          Length = 1406

 Score =  166 bits (421), Expect = 1e-39
 Identities = 79/149 (53%), Positives = 103/149 (69%)
 Frame = +1

Query: 4   RSQHRMEQKANAHRRELELKIGDQVLVRLQPYRQSTIAQRHSVKLSPRYYGPFPILERIG 183
           ++QHRM QK+NAHRR+L+L++GD VLVRLQPYRQ+T A R   KL+ RYYGP+ +LERIG
Sbjct: 540 QAQHRMTQKSNAHRRDLQLEVGDMVLVRLQPYRQTTAAHRPYQKLAKRYYGPYQVLERIG 599

Query: 184 PVAYKLGLPPASRVHPVFHISALKLFKGSAMTQACPLPSNADDTEFISKPVAICATRITF 363
            VAY+L LP   ++HP+FHISA K F+G    +  PLP+       +    A+CA R   
Sbjct: 600 AVAYRLALPSGCKIHPMFHISAFKPFRGPVPEEVYPLPTETMGIHPLLVLAAVCAVRTIL 659

Query: 364 QKGKPVHQILVRWQHVPPEGATWENFEEF 450
           ++GK V QILV+W    PE ATWE+F  F
Sbjct: 660 RQGKEVQQILVQWTASDPENATWEDFVAF 688


>gb|AAO23078.1| polyprotein [Glycine max]
          Length = 1552

 Score =  139 bits (350), Expect = 2e-31
 Identities = 68/148 (45%), Positives = 99/148 (66%)
 Frame = +1

Query: 4    RSQHRMEQKANAHRRELELKIGDQVLVRLQPYRQSTIAQRHSVKLSPRYYGPFPILERIG 183
            R+Q  M+++A+  R ++  +IGD+VLV+LQPYRQ +   R + KLS RY+GPF +L +IG
Sbjct: 1334 RAQQVMKRQADKKRLDVSFQIGDEVLVKLQPYRQHSAVLRKNQKLSMRYFGPFKVLAKIG 1393

Query: 184  PVAYKLGLPPASRVHPVFHISALKLFKGSAMTQACPLPSNADDTEFISKPVAICATRITF 363
             VAYKL LP A+R+HPVFH+S LK F G+A     PLP    +   + +PV I A+RI  
Sbjct: 1394 DVAYKLELPSAARIHPVFHVSQLKPFNGTAQDPYLPLPLTVTEMGPVMQPVKILASRIII 1453

Query: 364  QKGKPVHQILVRWQHVPPEGATWENFEE 447
            +    + QILV+W++   + ATWE+ E+
Sbjct: 1454 RGHNQIEQILVQWENGLQDEATWEDIED 1481


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score =  138 bits (348), Expect = 4e-31
 Identities = 70/144 (48%), Positives = 96/144 (66%)
 Frame = +1

Query: 4    RSQHRMEQKANAHRRELELKIGDQVLVRLQPYRQSTIAQRHSVKLSPRYYGPFPILERIG 183
            R+QHRM+Q A+ HR E E +IGD V V+LQPYRQ ++  R + KLSP+Y+GP+ I++R G
Sbjct: 1344 RAQHRMKQFADQHRTEREFEIGDYVYVKLQPYRQQSVVMRANQKLSPKYFGPYKIIDRCG 1403

Query: 184  PVAYKLGLPPASRVHPVFHISALKLFKGSAMTQACPLPSNADDTEFISKPVAICATRITF 363
             VAYKL LP  S+VHPVFH+S LK+  G+  T    LPS   D  F   P  +   ++  
Sbjct: 1404 EVAYKLALPSYSQVHPVFHVSQLKVLVGNVST-TVHLPSVMQDV-FEKVPEKVVERKMVN 1461

Query: 364  QKGKPVHQILVRWQHVPPEGATWE 435
            ++GK V ++LV+W + P E ATWE
Sbjct: 1462 RQGKAVTKVLVKWSNEPLEEATWE 1485


>emb|CAN73669.1| hypothetical protein VITISV_003711 [Vitis vinifera]
          Length = 1308

 Score =  137 bits (345), Expect = 9e-31
 Identities = 66/144 (45%), Positives = 96/144 (66%)
 Frame = +1

Query: 7    SQHRMEQKANAHRRELELKIGDQVLVRLQPYRQSTIAQRHSVKLSPRYYGPFPILERIGP 186
            S +RM+Q+A++ RR+++  +GDQVL++L+PYRQ  + +R   KLS  YYGP+PILE+IG 
Sbjct: 1123 SMNRMKQQADSKRRDIQFAVGDQVLLKLRPYRQQIVFKRGHKKLSNCYYGPYPILEKIGA 1182

Query: 187  VAYKLGLPPASRVHPVFHISALKLFKGSAMTQACPLPSNADDTEFISKPVAICATRITFQ 366
            VAY+L LPP +R+HPVFH+S LK + G+       LP  AD+     +P  I  TR   +
Sbjct: 1183 VAYRLQLPPTARIHPVFHVSLLKSYNGTPAVTPLDLPPLADNGVITLEPQQILDTRWIKR 1242

Query: 367  KGKPVHQILVRWQHVPPEGATWEN 438
                + + LV W+H+P E ATWE+
Sbjct: 1243 GDTFMEESLVHWKHLPHEEATWES 1266


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