BLASTX nr result

ID: Dioscorea21_contig00037936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037936
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containi...    64   1e-08

>ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 1005

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 11/79 (13%)
 Frame = -1

Query: 228 INHPNSVDYTPRNRQPAA-----------FDSGGILRSYSIMLQCCTSKRSVLEGKSVHA 82
           ++ PN  + TP N+ P             FDS G LR YS ML+ C SK  + EGK++H 
Sbjct: 93  LSSPNRPNSTPGNKIPETVEKKRIWRGLDFDSKGRLRQYSGMLRTCASKGDLNEGKAIHG 152

Query: 81  RLLRSNVEPDVHLWDCLVN 25
           ++++S + PD HLW+ LVN
Sbjct: 153 QVIKSGINPDSHLWNSLVN 171


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