BLASTX nr result

ID: Dioscorea21_contig00037919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037919
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001294403.1| NADH dehydrogenase subunit 1 [Dioscorea elep...   175   3e-42
ref|YP_740620.1| NADH-plastoquinone oxidoreductase subunit 1 [Pl...   160   1e-37
gb|AEZ01472.1| NADH-plastoquinone oxidoreductase subunit 1 (chlo...   159   2e-37
gb|AFA27814.1| NADH-plastoquinone oxidoreductase subunit 1, part...   159   3e-37
ref|YP_003434030.1| NADH-plastoquinone oxidoreductase subunit 1 ...   158   4e-37

>ref|YP_001294403.1| NADH dehydrogenase subunit 1 [Dioscorea elephantipes]
           gi|148668096|gb|ABR01480.1| NADH-plastoquinone
           oxidoreductase subunit 1 [Dioscorea elephantipes]
          Length = 363

 Score =  175 bits (444), Expect = 3e-42
 Identities = 86/89 (96%), Positives = 86/89 (96%)
 Frame = +3

Query: 3   LFYVASYLNLLVSSLFVTVLYLGGWNLFIPYIFIPELLVKNKMVVVFGMTIGIFITLVKA 182
           LFYVASYLNLLVSSLFVTVLYLGGWN FIPYIFIPEL VK KMVVVFGMTIGIFITLVKA
Sbjct: 255 LFYVASYLNLLVSSLFVTVLYLGGWNFFIPYIFIPELFVKKKMVVVFGMTIGIFITLVKA 314

Query: 183 YLFLFISITTRWTLPRMRMDQLLNLGWKF 269
           YLFLFISITTRWTLPRMRMDQLLNLGWKF
Sbjct: 315 YLFLFISITTRWTLPRMRMDQLLNLGWKF 343


>ref|YP_740620.1| NADH-plastoquinone oxidoreductase subunit 1 [Platanus occidentalis]
           gi|122165988|sp|Q09FZ1.1|NU1C_PLAOC RecName:
           Full=NAD(P)H-quinone oxidoreductase subunit 1,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase
           subunit 1; Short=NDH subunit 1; AltName:
           Full=NADH-plastoquinone oxidoreductase subunit 1
           gi|114054440|gb|ABI49834.1| NADH-plastoquinone
           oxidoreductase subunit 1 [Platanus occidentalis]
          Length = 363

 Score =  160 bits (405), Expect = 1e-37
 Identities = 80/89 (89%), Positives = 81/89 (91%)
 Frame = +3

Query: 3   LFYVASYLNLLVSSLFVTVLYLGGWNLFIPYIFIPELLVKNKMVVVFGMTIGIFITLVKA 182
           LFYVASYLNLLVSSLFVTVLYLGGWNL IPYIFIPEL   NK+  VFG TIGIFITL KA
Sbjct: 255 LFYVASYLNLLVSSLFVTVLYLGGWNLSIPYIFIPELFEINKVSGVFGTTIGIFITLAKA 314

Query: 183 YLFLFISITTRWTLPRMRMDQLLNLGWKF 269
           YLFLFISITTRWTLPRMRMDQLLNLGWKF
Sbjct: 315 YLFLFISITTRWTLPRMRMDQLLNLGWKF 343


>gb|AEZ01472.1| NADH-plastoquinone oxidoreductase subunit 1 (chloroplast)
           [Japonolirion osense]
          Length = 363

 Score =  159 bits (402), Expect = 2e-37
 Identities = 79/89 (88%), Positives = 80/89 (89%)
 Frame = +3

Query: 3   LFYVASYLNLLVSSLFVTVLYLGGWNLFIPYIFIPELLVKNKMVVVFGMTIGIFITLVKA 182
           LFYVASYLNLLVSSLFVTVLYLGGWN  IPYIFIPEL   NKM  VFGMT+GIFITL KA
Sbjct: 255 LFYVASYLNLLVSSLFVTVLYLGGWNFSIPYIFIPELFGINKMGRVFGMTLGIFITLAKA 314

Query: 183 YLFLFISITTRWTLPRMRMDQLLNLGWKF 269
           YLFLFI ITTRWTLPRMRMDQLLNLGWKF
Sbjct: 315 YLFLFIPITTRWTLPRMRMDQLLNLGWKF 343


>gb|AFA27814.1| NADH-plastoquinone oxidoreductase subunit 1, partial [Sparganium
           eurycarpum]
          Length = 395

 Score =  159 bits (401), Expect = 3e-37
 Identities = 78/89 (87%), Positives = 81/89 (91%)
 Frame = +3

Query: 3   LFYVASYLNLLVSSLFVTVLYLGGWNLFIPYIFIPELLVKNKMVVVFGMTIGIFITLVKA 182
           LFY+ASYLNLLVSSLFVTVLYLGGWNL IPYI IPEL   NK+  +FGMTIGIFITL KA
Sbjct: 287 LFYLASYLNLLVSSLFVTVLYLGGWNLSIPYISIPELFGINKLAGIFGMTIGIFITLAKA 346

Query: 183 YLFLFISITTRWTLPRMRMDQLLNLGWKF 269
           YLFLFISITTRWTLPRMRMDQLLNLGWKF
Sbjct: 347 YLFLFISITTRWTLPRMRMDQLLNLGWKF 375


>ref|YP_003434030.1| NADH-plastoquinone oxidoreductase subunit 1 [Typha latifolia]
           gi|281371827|gb|ADA63754.1| NADH-plastoquinone
           oxidoreductase subunit 1 [Typha latifolia]
          Length = 362

 Score =  158 bits (400), Expect = 4e-37
 Identities = 78/89 (87%), Positives = 80/89 (89%)
 Frame = +3

Query: 3   LFYVASYLNLLVSSLFVTVLYLGGWNLFIPYIFIPELLVKNKMVVVFGMTIGIFITLVKA 182
           LFY+ASYLNLLVSSLFVTVLYLGGWN  IPYI IPEL   NKM  +FGMTIGIFITL KA
Sbjct: 254 LFYLASYLNLLVSSLFVTVLYLGGWNFSIPYISIPELFGINKMAGIFGMTIGIFITLTKA 313

Query: 183 YLFLFISITTRWTLPRMRMDQLLNLGWKF 269
           YLFLFISITTRWTLPRMRMDQLLNLGWKF
Sbjct: 314 YLFLFISITTRWTLPRMRMDQLLNLGWKF 342


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