BLASTX nr result

ID: Dioscorea21_contig00037887 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037887
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308584.1| predicted protein [Populus trichocarpa] gi|2...   127   4e-32
ref|XP_004165597.1| PREDICTED: uncharacterized protein LOC101231...   125   4e-31
ref|XP_004141419.1| PREDICTED: uncharacterized protein LOC101213...   125   4e-31
ref|NP_197967.2| uncharacterized protein [Arabidopsis thaliana] ...   118   3e-29
gb|AAD40125.1|AF149413_6 contains similarity to number of Arabid...   118   3e-29

>ref|XP_002308584.1| predicted protein [Populus trichocarpa] gi|222854560|gb|EEE92107.1|
           predicted protein [Populus trichocarpa]
          Length = 418

 Score =  127 bits (320), Expect(2) = 4e-32
 Identities = 64/133 (48%), Positives = 78/133 (58%), Gaps = 1/133 (0%)
 Frame = -1

Query: 408 NHSQDNKNEAWWFIFAHNITVGYWPAEIFRGMSRIATLVEWGGDVYTPRLRSGGPHTATA 229
           N   D     WW +F HNI VGYWP  +F  +   AT VEWGG VY+  +R   PHT TA
Sbjct: 288 NIFMDPTTTNWWLVF-HNIAVGYWPGSLFSLLKHSATSVEWGGQVYSVNVRKT-PHTKTA 345

Query: 228 MGSGSFANEHWGYSSFIQTPRIMDYSSTYKYPQPYGAYTPARNCYSGENY-ASKLFTEPL 52
           MGSG  A E +G++ FI  PRI+DYS +YKYP     +    NCYS  NY A     E  
Sbjct: 346 MGSGYDAEELYGFACFIGQPRILDYSKSYKYPTFVAVWKDEYNCYSAVNYKAGNANDEAT 405

Query: 51  FYFGGPGRNMYCP 13
           F+FGGPG++  CP
Sbjct: 406 FFFGGPGQSYRCP 418



 Score = 35.4 bits (80), Expect(2) = 4e-32
 Identities = 16/25 (64%), Positives = 18/25 (72%)
 Frame = -2

Query: 488 FDLLCPGFVQLSNEISLGAPIEPVS 414
           FDL C GFVQ S EI+LG  +EP S
Sbjct: 252 FDLTCYGFVQTSTEIALGGAVEPGS 276


>ref|XP_004165597.1| PREDICTED: uncharacterized protein LOC101231919 [Cucumis sativus]
          Length = 409

 Score =  125 bits (314), Expect(2) = 4e-31
 Identities = 59/128 (46%), Positives = 80/128 (62%)
 Frame = -1

Query: 399 QDNKNEAWWFIFAHNITVGYWPAEIFRGMSRIATLVEWGGDVYTPRLRSGGPHTATAMGS 220
           QD  +  WW  F  N  VGYWP+ +F  +   ATLVEWGG+V++  ++   PHT T MGS
Sbjct: 283 QDPHSGNWWLKFQGN-PVGYWPSTLFGYLDHSATLVEWGGEVFSSNIKIV-PHTGTGMGS 340

Query: 219 GSFANEHWGYSSFIQTPRIMDYSSTYKYPQPYGAYTPARNCYSGENYASKLFTEPLFYFG 40
           G +A+  + Y+SF++ PRI+DYS   KYP   G +    +CYS +NY     TEP+FYFG
Sbjct: 341 GDYASGLYEYASFVKEPRIVDYSLQLKYPDRVGTWADEPSCYSVDNYQQSYTTEPVFYFG 400

Query: 39  GPGRNMYC 16
           GPG +  C
Sbjct: 401 GPGLSRDC 408



 Score = 34.3 bits (77), Expect(2) = 4e-31
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = -2

Query: 488 FDLLCPGFVQLSNEISLGAPIEPVS 414
           FDL C GFVQ +  +++GA IEP+S
Sbjct: 244 FDLTCSGFVQTNPSVAIGAVIEPLS 268


>ref|XP_004141419.1| PREDICTED: uncharacterized protein LOC101213587 [Cucumis sativus]
          Length = 409

 Score =  125 bits (314), Expect(2) = 4e-31
 Identities = 59/128 (46%), Positives = 80/128 (62%)
 Frame = -1

Query: 399 QDNKNEAWWFIFAHNITVGYWPAEIFRGMSRIATLVEWGGDVYTPRLRSGGPHTATAMGS 220
           QD  +  WW  F  N  VGYWP+ +F  +   ATLVEWGG+V++  ++   PHT T MGS
Sbjct: 283 QDPHSGNWWLKFQGN-PVGYWPSTLFGYLDHSATLVEWGGEVFSSNIKIV-PHTGTGMGS 340

Query: 219 GSFANEHWGYSSFIQTPRIMDYSSTYKYPQPYGAYTPARNCYSGENYASKLFTEPLFYFG 40
           G +A+  + Y+SF++ PRI+DYS   KYP   G +    +CYS +NY     TEP+FYFG
Sbjct: 341 GDYASGLYEYASFVKEPRIVDYSLQLKYPDRVGTWADEPSCYSVDNYQQSYTTEPVFYFG 400

Query: 39  GPGRNMYC 16
           GPG +  C
Sbjct: 401 GPGLSRDC 408



 Score = 34.3 bits (77), Expect(2) = 4e-31
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = -2

Query: 488 FDLLCPGFVQLSNEISLGAPIEPVS 414
           FDL C GFVQ +  +++GA IEP+S
Sbjct: 244 FDLTCSGFVQTNPSVAIGAVIEPLS 268


>ref|NP_197967.2| uncharacterized protein [Arabidopsis thaliana]
           gi|332006121|gb|AED93504.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 432

 Score =  118 bits (295), Expect(2) = 3e-29
 Identities = 55/125 (44%), Positives = 70/125 (56%)
 Frame = -1

Query: 387 NEAWWFIFAHNITVGYWPAEIFRGMSRIATLVEWGGDVYTPRLRSGGPHTATAMGSGSFA 208
           N   W++   N  +GYWP  +F  +   AT V+WGG+V++P +    PHT TAMGSG +A
Sbjct: 308 NSGNWWLTCENNVLGYWPGTLFNYLKHSATAVQWGGEVHSPNVVLKKPHTTTAMGSGQWA 367

Query: 207 NEHWGYSSFIQTPRIMDYSSTYKYPQPYGAYTPARNCYSGENYASKLFTEPLFYFGGPGR 28
           +  W  + F    RI DYS   KYPQ    Y    NCYS   +     +EP FYFGGPGR
Sbjct: 368 SYIWAEACFHTNLRIKDYSMQLKYPQFLSEYADEYNCYSTLLHRKTYMSEPHFYFGGPGR 427

Query: 27  NMYCP 13
           N  CP
Sbjct: 428 NSRCP 432



 Score = 35.4 bits (80), Expect(2) = 3e-29
 Identities = 15/27 (55%), Positives = 20/27 (74%)
 Frame = -2

Query: 485 DLLCPGFVQLSNEISLGAPIEPVSDKT 405
           +LLC GFVQ S + +LGA +EPVS  +
Sbjct: 267 NLLCAGFVQTSKKFALGATVEPVSSSS 293


>gb|AAD40125.1|AF149413_6 contains similarity to number of Arabidopsis thaliana hypothetical
           proteins including AC004521 and AL031326 [Arabidopsis
           thaliana]
          Length = 413

 Score =  118 bits (295), Expect(2) = 3e-29
 Identities = 55/125 (44%), Positives = 70/125 (56%)
 Frame = -1

Query: 387 NEAWWFIFAHNITVGYWPAEIFRGMSRIATLVEWGGDVYTPRLRSGGPHTATAMGSGSFA 208
           N   W++   N  +GYWP  +F  +   AT V+WGG+V++P +    PHT TAMGSG +A
Sbjct: 289 NSGNWWLTCENNVLGYWPGTLFNYLKHSATAVQWGGEVHSPNVVLKKPHTTTAMGSGQWA 348

Query: 207 NEHWGYSSFIQTPRIMDYSSTYKYPQPYGAYTPARNCYSGENYASKLFTEPLFYFGGPGR 28
           +  W  + F    RI DYS   KYPQ    Y    NCYS   +     +EP FYFGGPGR
Sbjct: 349 SYIWAEACFHTNLRIKDYSMQLKYPQFLSEYADEYNCYSTLLHRKTYMSEPHFYFGGPGR 408

Query: 27  NMYCP 13
           N  CP
Sbjct: 409 NSRCP 413



 Score = 35.4 bits (80), Expect(2) = 3e-29
 Identities = 15/27 (55%), Positives = 20/27 (74%)
 Frame = -2

Query: 485 DLLCPGFVQLSNEISLGAPIEPVSDKT 405
           +LLC GFVQ S + +LGA +EPVS  +
Sbjct: 248 NLLCAGFVQTSKKFALGATVEPVSSSS 274


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