BLASTX nr result

ID: Dioscorea21_contig00037882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037882
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279486.1| PREDICTED: putative transcription factor bHL...   108   6e-22
ref|XP_002514122.1| DNA binding protein, putative [Ricinus commu...   106   2e-21
ref|XP_004173552.1| PREDICTED: LOW QUALITY PROTEIN: putative tra...   102   4e-20
ref|XP_002309216.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20
gb|AFW71309.1| putative HLH DNA-binding domain superfamily prote...    95   7e-18

>ref|XP_002279486.1| PREDICTED: putative transcription factor bHLH041 [Vitis vinifera]
           gi|297738655|emb|CBI27900.3| unnamed protein product
           [Vitis vinifera]
          Length = 513

 Score =  108 bits (269), Expect = 6e-22
 Identities = 65/149 (43%), Positives = 96/149 (64%), Gaps = 4/149 (2%)
 Frame = +1

Query: 70  QKMIKKSITMLRRINKMRNQE----SALTSNQVSHVISERRRREKLNGSFDQLRSLLPPG 237
           Q M+K+S+   + ++  R QE    S  + +Q+ H+ISER+RREKLN SF  LR+LLPPG
Sbjct: 303 QSMLKRSMAYFKNLHLRRRQELIQGSHPSVSQLHHMISERKRREKLNESFHALRTLLPPG 362

Query: 238 SKKDRATVLMKTKDYLKTLKDQISELQLENRMLEMKLKCPATDEINEQGLQASNFRSMLR 417
           SKKD+A+VL  T++YL +LK QI EL   N+ LE ++     +  NE G  +SN R  L 
Sbjct: 363 SKKDKASVLSGTREYLSSLKAQILELTQRNQALEAQINL-KNEGNNEGGGDSSNER--LS 419

Query: 418 VEIIKASVPSSEVQQISLRLTANANSALI 504
           V+I  AS P+ E + I L++T  A+ +++
Sbjct: 420 VQITNASEPTPEERNIDLQVTVRADCSIL 448


>ref|XP_002514122.1| DNA binding protein, putative [Ricinus communis]
           gi|223546578|gb|EEF48076.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 502

 Score =  106 bits (264), Expect = 2e-21
 Identities = 58/145 (40%), Positives = 91/145 (62%), Gaps = 7/145 (4%)
 Frame = +1

Query: 52  KANLHSQKMIKKSITMLRRINKMRNQESAL---TSNQVSHVISERRRREKLNGSFDQLRS 222
           +A+LH Q ++K+SIT  R +N  R +       T+ Q+ H+ISER+RREK+N SF+ LR 
Sbjct: 279 RASLHRQNLLKRSITYYRNLNIARREHMTANRPTTTQLHHMISERKRREKINESFEALRK 338

Query: 223 LLPPGSKKDRATVLMKTKDYLKTLKDQISELQLENRMLEMKLKCPATD----EINEQGLQ 390
           LLPP +KKD+A+VL +T++YL  LK Q++EL   N+ LE +L   A +    E+  +  Q
Sbjct: 339 LLPPEAKKDKASVLTRTREYLTLLKTQVAELSQRNQQLEAELLPAAIEAHAGEVIAENQQ 398

Query: 391 ASNFRSMLRVEIIKASVPSSEVQQI 465
           + ++   + V I   S  +SE ++I
Sbjct: 399 SGSWEGRVEVRITNVSESTSEDERI 423


>ref|XP_004173552.1| PREDICTED: LOW QUALITY PROTEIN: putative transcription factor
           bHLH041-like, partial [Cucumis sativus]
          Length = 461

 Score =  102 bits (253), Expect = 4e-20
 Identities = 59/141 (41%), Positives = 86/141 (60%), Gaps = 5/141 (3%)
 Frame = +1

Query: 70  QKMIKKSITMLRRINKMRNQE-----SALTSNQVSHVISERRRREKLNGSFDQLRSLLPP 234
           Q ++K+S+  +  +N MR +E     S  TS+Q+ HVISERRRREKLN SF  L+SLLPP
Sbjct: 268 QSLLKRSLAFMTNLNLMRVRERMPTTSRPTSSQLHHVISERRRREKLNDSFQALKSLLPP 327

Query: 235 GSKKDRATVLMKTKDYLKTLKDQISELQLENRMLEMKLKCPATDEINEQGLQASNFRSML 414
           G+KKD+ +VL  T++Y+ +LK Q++EL   N+ LE +L     +E  E+ +         
Sbjct: 328 GTKKDKGSVLTTTREYMSSLKAQVAELSRRNQQLEAQLLQSCKEEEKEEAIFPQK-EIRF 386

Query: 415 RVEIIKASVPSSEVQQISLRL 477
           RV I +    +SE Q I L +
Sbjct: 387 RVGISQVQESTSEGQIIDLNI 407


>ref|XP_002309216.1| predicted protein [Populus trichocarpa] gi|222855192|gb|EEE92739.1|
           predicted protein [Populus trichocarpa]
          Length = 395

 Score =  102 bits (253), Expect = 4e-20
 Identities = 59/163 (36%), Positives = 94/163 (57%), Gaps = 3/163 (1%)
 Frame = +1

Query: 25  SASAVNSDPKANLHSQKMIKKSITMLRRINKMRNQE---SALTSNQVSHVISERRRREKL 195
           SA A  +  +A+LH   M+ + IT  RR+N  R +       +S Q+ H+ISER+RREK+
Sbjct: 173 SALAPKTQTRASLHRHSMLTRVITYYRRLNIERREHMLGGRPSSTQLHHMISERKRREKI 232

Query: 196 NGSFDQLRSLLPPGSKKDRATVLMKTKDYLKTLKDQISELQLENRMLEMKLKCPATDEIN 375
           N SF  LRS+LPP +KKD+A++L +T++YL +LK Q+ EL  +N+ LE +L   A  ++ 
Sbjct: 233 NESFKALRSILPPEAKKDKASILTRTREYLTSLKAQVEELTRKNQKLEAQLSKAAVSQVR 292

Query: 376 EQGLQASNFRSMLRVEIIKASVPSSEVQQISLRLTANANSALI 504
           +   +       L V +   S  +SE + I L +     S ++
Sbjct: 293 DSSYE------RLDVRVTHISESTSEQRIIDLVVNLRGESPIL 329


>gb|AFW71309.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
          Length = 616

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 52/113 (46%), Positives = 73/113 (64%), Gaps = 21/113 (18%)
 Frame = +1

Query: 70  QKMIKKSITMLRRINKMR---------------------NQESALTSNQVSHVISERRRR 186
           Q+MIK  I++LRR++ +R                     +  +  TS+Q++H+ISERRRR
Sbjct: 340 QRMIKMGISILRRMHMLRFSRERTGTTMAQRGQEGEDDLSSPAVPTSSQLNHMISERRRR 399

Query: 187 EKLNGSFDQLRSLLPPGSKKDRATVLMKTKDYLKTLKDQISELQLENRMLEMK 345
           E+LN SF+ LR LLPPGSKKD+ATVL KT DY+  L  QI++L+ +NR LE +
Sbjct: 400 ERLNESFEALRGLLPPGSKKDKATVLAKTLDYMSILVAQIADLEAKNRSLESR 452


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