BLASTX nr result
ID: Dioscorea21_contig00037880
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00037880
(429 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI21510.3| unnamed protein product [Vitis vinifera] 98 8e-19
ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containi... 98 8e-19
ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containi... 96 3e-18
dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare] 94 9e-18
gb|EEC83413.1| hypothetical protein OsI_28873 [Oryza sativa Indi... 94 9e-18
>emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 97.8 bits (242), Expect = 8e-19
Identities = 53/116 (45%), Positives = 74/116 (63%)
Frame = -2
Query: 353 PMKQRLFDLLQSCISGKXXXXXXXXXXXLTITSGFQSDVFVANVLLSGYSKSSQIRHARK 174
P ++ +LLQ IS + I SG QSD F+AN+L++ SKS ++ +AR
Sbjct: 47 PKRREFANLLQLSIS-RNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARV 105
Query: 173 LFDGMPQRNLISWSTMISSYTHHRPSEEALSLFSCLRRCFSESPNEFILASVLRAC 6
+FD MP +NLI+WS+M+S Y+ SEEAL +F L+R E PNEF+LASV+RAC
Sbjct: 106 VFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRAC 161
Score = 65.9 bits (159), Expect = 3e-09
Identities = 35/83 (42%), Positives = 50/83 (60%)
Frame = -2
Query: 254 GFQSDVFVANVLLSGYSKSSQIRHARKLFDGMPQRNLISWSTMISSYTHHRPSEEALSLF 75
G + DV V NVL+ Y+K ++++ RKLFD M +N+ISW+TMIS Y + EA+ LF
Sbjct: 282 GTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLF 341
Query: 74 SCLRRCFSESPNEFILASVLRAC 6
+ R P+ F SVL +C
Sbjct: 342 GEMNR-LGWKPDGFACTSVLTSC 363
Score = 64.3 bits (155), Expect = 1e-08
Identities = 31/86 (36%), Positives = 53/86 (61%)
Frame = -2
Query: 263 ITSGFQSDVFVANVLLSGYSKSSQIRHARKLFDGMPQRNLISWSTMISSYTHHRPSEEAL 84
+ SGF DV+V L+ YSK+ I AR +FD + ++ ++W+T+I+ YT S +L
Sbjct: 178 VRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSL 237
Query: 83 SLFSCLRRCFSESPNEFILASVLRAC 6
LF+ +R + P+ ++++SVL AC
Sbjct: 238 ELFAQMRET-NVVPDRYVVSSVLSAC 262
Score = 62.4 bits (150), Expect = 4e-08
Identities = 34/86 (39%), Positives = 53/86 (61%)
Frame = -2
Query: 266 TITSGFQSDVFVANVLLSGYSKSSQIRHARKLFDGMPQRNLISWSTMISSYTHHRPSEEA 87
TI + +SD FV N L+ Y+KS+ + A+K+FD M ++N+IS++ MI Y+ EA
Sbjct: 379 TIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEA 438
Query: 86 LSLFSCLRRCFSESPNEFILASVLRA 9
L LF + R + PNEF A+++ A
Sbjct: 439 LELFHEM-RVRLQKPNEFTFAALITA 463
Score = 55.8 bits (133), Expect = 3e-06
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = -2
Query: 236 FVANVLLSGYSKSSQIRHARKLFDGMPQRNLISWSTMISSYTHHRPSEEALSLFSCLRRC 57
FV N L+ Y+K I ARK+F+ R+++ W++MIS++ H +EEAL +F R
Sbjct: 490 FVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMF---REM 546
Query: 56 FSE--SPNEFILASVLRAC 6
E PN +VL AC
Sbjct: 547 MKEGIQPNYVTFVAVLSAC 565
>ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 97.8 bits (242), Expect = 8e-19
Identities = 53/116 (45%), Positives = 74/116 (63%)
Frame = -2
Query: 353 PMKQRLFDLLQSCISGKXXXXXXXXXXXLTITSGFQSDVFVANVLLSGYSKSSQIRHARK 174
P ++ +LLQ IS + I SG QSD F+AN+L++ SKS ++ +AR
Sbjct: 25 PKRREFANLLQLSIS-RNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARV 83
Query: 173 LFDGMPQRNLISWSTMISSYTHHRPSEEALSLFSCLRRCFSESPNEFILASVLRAC 6
+FD MP +NLI+WS+M+S Y+ SEEAL +F L+R E PNEF+LASV+RAC
Sbjct: 84 VFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRAC 139
Score = 65.9 bits (159), Expect = 3e-09
Identities = 35/83 (42%), Positives = 50/83 (60%)
Frame = -2
Query: 254 GFQSDVFVANVLLSGYSKSSQIRHARKLFDGMPQRNLISWSTMISSYTHHRPSEEALSLF 75
G + DV V NVL+ Y+K ++++ RKLFD M +N+ISW+TMIS Y + EA+ LF
Sbjct: 260 GTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLF 319
Query: 74 SCLRRCFSESPNEFILASVLRAC 6
+ R P+ F SVL +C
Sbjct: 320 GEMNR-LGWKPDGFACTSVLTSC 341
Score = 64.7 bits (156), Expect = 8e-09
Identities = 33/86 (38%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = -2
Query: 263 ITSGFQSDVFVANVLLSGYSKSSQIRHARKLFDGMPQRNLISWSTMISSYTHHRPSEEAL 84
I G D+F + L+ YSK S ++ AR +F+ M +++++ W+ M YT H +EEAL
Sbjct: 459 IKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEAL 518
Query: 83 SLFSCLRRCFS-ESPNEFILASVLRA 9
L+S L+ FS + PNEF A+++ A
Sbjct: 519 KLYSTLQ--FSRQKPNEFTFAALITA 542
Score = 64.3 bits (155), Expect = 1e-08
Identities = 31/86 (36%), Positives = 53/86 (61%)
Frame = -2
Query: 263 ITSGFQSDVFVANVLLSGYSKSSQIRHARKLFDGMPQRNLISWSTMISSYTHHRPSEEAL 84
+ SGF DV+V L+ YSK+ I AR +FD + ++ ++W+T+I+ YT S +L
Sbjct: 156 VRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSL 215
Query: 83 SLFSCLRRCFSESPNEFILASVLRAC 6
LF+ +R + P+ ++++SVL AC
Sbjct: 216 ELFAQMRET-NVVPDRYVVSSVLSAC 240
Score = 56.2 bits (134), Expect = 3e-06
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = -2
Query: 266 TITSGFQSDVFVANVLLSGYSKSSQIRHARKLFDGMPQRNLISWSTMISSYTHHRPSEEA 87
TI + +SD FV N L+ Y+KS+ + A+K+FD M ++N+IS++ MI Y+ EA
Sbjct: 357 TIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEA 416
Query: 86 LSLFSCLR-RCFSESPNEFI 30
L LF +R R F S F+
Sbjct: 417 LELFHEMRVRLFPPSLLTFV 436
Score = 55.8 bits (133), Expect = 3e-06
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = -2
Query: 236 FVANVLLSGYSKSSQIRHARKLFDGMPQRNLISWSTMISSYTHHRPSEEALSLFSCLRRC 57
FV N L+ Y+K I ARK+F+ R+++ W++MIS++ H +EEAL +F R
Sbjct: 569 FVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMF---REM 625
Query: 56 FSE--SPNEFILASVLRAC 6
E PN +VL AC
Sbjct: 626 MKEGIQPNYVTFVAVLSAC 644
>ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 95.9 bits (237), Expect = 3e-18
Identities = 48/112 (42%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
Frame = -2
Query: 338 LFDLLQSCISGKXXXXXXXXXXXLTITSGFQSDVFVANVLLSGYSKSSQIRHARKLFDGM 159
L LL SC++G + +G D+F+AN+LL YSK ++R AR+LFD M
Sbjct: 13 LAQLLLSCLAGDRLHRLLPLAHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRM 72
Query: 158 PQRNLISWSTMISSYTHHRPSEEALSLFSCLRRCF-SESPNEFILASVLRAC 6
P +NL+SW + IS + H E+A++LF+ +R E+PNEF+LAS LRAC
Sbjct: 73 PHKNLVSWGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLASALRAC 124
Score = 61.6 bits (148), Expect = 6e-08
Identities = 33/81 (40%), Positives = 49/81 (60%)
Frame = -2
Query: 248 QSDVFVANVLLSGYSKSSQIRHARKLFDGMPQRNLISWSTMISSYTHHRPSEEALSLFSC 69
++D V N L+ Y K S++ ARKLFD M RNL+SW+TMI+ Y + EA+++F
Sbjct: 247 ETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQ 306
Query: 68 LRRCFSESPNEFILASVLRAC 6
L + P+ F AS+L +C
Sbjct: 307 LSQ-EGWQPDVFACASILNSC 326
Score = 56.2 bits (134), Expect = 3e-06
Identities = 32/86 (37%), Positives = 47/86 (54%)
Frame = -2
Query: 263 ITSGFQSDVFVANVLLSGYSKSSQIRHARKLFDGMPQRNLISWSTMISSYTHHRPSEEAL 84
I +G SD V+N L+ Y+K I+ R LF+ +++I W++MIS+Y H +EEAL
Sbjct: 545 IKAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEAL 604
Query: 83 SLFSCLRRCFSESPNEFILASVLRAC 6
+F + E PN VL AC
Sbjct: 605 YVFRMMGGTGVE-PNYVTFVGVLSAC 629
>dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 783
Score = 94.4 bits (233), Expect = 9e-18
Identities = 50/116 (43%), Positives = 66/116 (56%), Gaps = 5/116 (4%)
Frame = -2
Query: 338 LFDLLQSCISGKXXXXXXXXXXXLTITSGFQSDVFVANVLLSGYSKSSQIRHARKLFDGM 159
L LL SC++G + SG D+F+AN+LL GYSK ++ AR+LFD M
Sbjct: 32 LAQLLLSCLAGDRLRRVLPPAHARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSM 91
Query: 158 PQRNLISWSTMISSYTHHRPSEEALSLFSCLRRCFS-----ESPNEFILASVLRAC 6
P RNL+SW + IS Y H ++AL LF+ + E PNEF+LAS LRAC
Sbjct: 92 PSRNLVSWGSAISMYAQHGREDDALLLFAAFPSAGAASPDGEPPNEFLLASALRAC 147
Score = 63.5 bits (153), Expect = 2e-08
Identities = 33/81 (40%), Positives = 48/81 (59%)
Frame = -2
Query: 248 QSDVFVANVLLSGYSKSSQIRHARKLFDGMPQRNLISWSTMISSYTHHRPSEEALSLFSC 69
+SD V N L+ Y K S++ AR+LFD M RNL+SW+TMI+ Y + EA+S+F
Sbjct: 270 ESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQ 329
Query: 68 LRRCFSESPNEFILASVLRAC 6
L + P+ F S+L +C
Sbjct: 330 LSQA-GWQPDVFACTSILNSC 349
Score = 58.5 bits (140), Expect = 5e-07
Identities = 32/86 (37%), Positives = 47/86 (54%)
Frame = -2
Query: 263 ITSGFQSDVFVANVLLSGYSKSSQIRHARKLFDGMPQRNLISWSTMISSYTHHRPSEEAL 84
I +G SD ++N L+ Y+K I R LF+ +++I W++MIS+Y H +EEAL
Sbjct: 568 IKAGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAEEAL 627
Query: 83 SLFSCLRRCFSESPNEFILASVLRAC 6
+F + E PN SVL AC
Sbjct: 628 HVFGMMEGAGVE-PNYVTFVSVLSAC 652
>gb|EEC83413.1| hypothetical protein OsI_28873 [Oryza sativa Indica Group]
Length = 481
Score = 94.4 bits (233), Expect = 9e-18
Identities = 45/84 (53%), Positives = 59/84 (70%)
Frame = -2
Query: 257 SGFQSDVFVANVLLSGYSKSSQIRHARKLFDGMPQRNLISWSTMISSYTHHRPSEEALSL 78
+G DVF+ N+LL GYS ++R AR LFD MP RNL+SW ++IS YT H + A+SL
Sbjct: 63 AGGLDDVFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGRDDCAISL 122
Query: 77 FSCLRRCFSESPNEFILASVLRAC 6
F+ ++ E PNEF+LASVLRAC
Sbjct: 123 FAAFQKASCEVPNEFLLASVLRAC 146
Score = 63.9 bits (154), Expect = 1e-08
Identities = 34/84 (40%), Positives = 51/84 (60%)
Frame = -2
Query: 257 SGFQSDVFVANVLLSGYSKSSQIRHARKLFDGMPQRNLISWSTMISSYTHHRPSEEALSL 78
S ++D V NVL+ Y K S++ ARKLFD M RNL+SW+TMIS Y + + EA+++
Sbjct: 266 SATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITM 325
Query: 77 FSCLRRCFSESPNEFILASVLRAC 6
F + + P+ F S+L +C
Sbjct: 326 FWNMTQA-GWQPDGFACTSILNSC 348