BLASTX nr result

ID: Dioscorea21_contig00037874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037874
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW79963.1| hypothetical protein ZEAMMB73_998204 [Zea mays]        109   2e-22
ref|XP_002314851.1| predicted protein [Populus trichocarpa] gi|2...   108   5e-22
ref|XP_002312409.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_002527000.1| zinc finger protein, putative [Ricinus commu...   104   9e-21
emb|CBI26997.3| unnamed protein product [Vitis vinifera]              103   1e-20

>gb|AFW79963.1| hypothetical protein ZEAMMB73_998204 [Zea mays]
          Length = 269

 Score =  109 bits (273), Expect = 2e-22
 Identities = 58/99 (58%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
 Frame = -1

Query: 295 SSTTTTAGEQRKFECQYCYREFANSQALGGHQNAHKKERQQLKRAQMXXXXXXXXHRSPP 116
           ++T T AG+ R+FECQYC REFANSQALGGHQNAHKKERQQLKRAQ+          +  
Sbjct: 62  TTTATAAGDARRFECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQAAAAAAGRVAAG 121

Query: 115 GTLYPR-NPMTSAFAPPPPLLSVAPTAPPQLVVPAPSWV 2
           G LYPR NPM SAF PPP L      A P       SWV
Sbjct: 122 GALYPRANPMVSAFVPPPHLFGGGGDAAP------TSWV 154


>ref|XP_002314851.1| predicted protein [Populus trichocarpa] gi|222863891|gb|EEF01022.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score =  108 bits (270), Expect = 5e-22
 Identities = 59/96 (61%), Positives = 68/96 (70%), Gaps = 2/96 (2%)
 Frame = -1

Query: 283 TTAGEQRKFECQYCYREFANSQALGGHQNAHKKERQQLKRAQMXXXXXXXXHRSPPGTLY 104
           T +G+ RK+ECQYC REFANSQALGGHQNAHKKERQQLKRAQM        + +     +
Sbjct: 60  TASGDSRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQM----QATRNAAAAAVSF 115

Query: 103 PRNPMTSAFAPPPPLLSVAPTAPPQLVVPA--PSWV 2
            RNPM SAFAPPP LL+    A  Q++VPA  PSWV
Sbjct: 116 GRNPMISAFAPPPHLLA---QAAGQVMVPAASPSWV 148


>ref|XP_002312409.1| predicted protein [Populus trichocarpa] gi|222852229|gb|EEE89776.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score =  107 bits (266), Expect = 1e-21
 Identities = 59/98 (60%), Positives = 67/98 (68%), Gaps = 2/98 (2%)
 Frame = -1

Query: 289 TTTTAGEQRKFECQYCYREFANSQALGGHQNAHKKERQQLKRAQMXXXXXXXXHRSPPGT 110
           T T  G+ RK+ECQYC REFANSQALGGHQNAHKKERQQLKRAQM        + +    
Sbjct: 56  TATATGDSRKYECQYCSREFANSQALGGHQNAHKKERQQLKRAQM----QATRNAAAAAV 111

Query: 109 LYPRNPMTSAFAPPPPLLSVAPTAPPQLVVP--APSWV 2
            + RNPM SAFAPPP LL+    A  Q+VVP  + SWV
Sbjct: 112 SFGRNPMISAFAPPPHLLA---QAAGQVVVPEASQSWV 146


>ref|XP_002527000.1| zinc finger protein, putative [Ricinus communis]
           gi|223533635|gb|EEF35372.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 247

 Score =  104 bits (259), Expect = 9e-21
 Identities = 57/98 (58%), Positives = 61/98 (62%)
 Frame = -1

Query: 295 SSTTTTAGEQRKFECQYCYREFANSQALGGHQNAHKKERQQLKRAQMXXXXXXXXHRSPP 116
           S    +    RK+ECQYC REFANSQALGGHQNAHKKERQQLKRAQM          +  
Sbjct: 47  SPEAASTDSNRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQM--QATRNAAAAAA 104

Query: 115 GTLYPRNPMTSAFAPPPPLLSVAPTAPPQLVVPAPSWV 2
              + RNPM SAFAPPP LL  AP  P  L   A SWV
Sbjct: 105 AVSFGRNPMISAFAPPPHLL--APPGPVVLPAAASSWV 140


>emb|CBI26997.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score =  103 bits (257), Expect = 1e-20
 Identities = 63/105 (60%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
 Frame = -1

Query: 298 PSSTTTTAGEQRKFECQYCYREFANSQALGGHQNAHKKERQQLKRAQMXXXXXXXXHRSP 119
           P S    A   RK+ECQYC REFANSQALGGHQNAHKKERQQLKRAQM            
Sbjct: 81  PESGGFPATGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQMQATRN------- 133

Query: 118 PGTLYPRNPMTSAFAPPPPLLSVAPTAPPQLVVPA------PSWV 2
             T Y RNPM SAFAPPP LL  AP  P  +VVPA       SWV
Sbjct: 134 AATSYIRNPMISAFAPPPHLL--APAGP--VVVPAGAAPQSASWV 174


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