BLASTX nr result

ID: Dioscorea21_contig00037855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037855
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q64MA3.1|GENL1_ORYSJ RecName: Full=Flap endonuclease GEN-like...   136   2e-30
gb|EAZ09797.1| hypothetical protein OsI_32084 [Oryza sativa Indi...   136   2e-30
ref|XP_003578463.1| PREDICTED: flap endonuclease GEN-like 1-like...   131   5e-29
gb|ABG73449.1| DNA repair protein [Oryza brachyantha]                 130   1e-28
gb|AAY32559.1| single strand DNA repair-like protein [Triticum m...   123   2e-26

>sp|Q64MA3.1|GENL1_ORYSJ RecName: Full=Flap endonuclease GEN-like 1; Short=OsGEN-L;
           Short=Protein OsGEN-like; AltName: Full=OsRAD
           gi|52075592|dbj|BAD46702.1| putative single-strand DNA
           endonuclease-1 [Oryza sativa Japonica Group]
           gi|62122402|dbj|BAD93194.1| putative nuclease [Oryza
           sativa Japonica Group] gi|62122736|dbj|BAD93331.1|
           putative nuclease [Oryza sativa Japonica Group]
           gi|215693373|dbj|BAG88755.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222630495|gb|EEE62627.1| hypothetical protein
           OsJ_17430 [Oryza sativa Japonica Group]
          Length = 629

 Score =  136 bits (342), Expect = 2e-30
 Identities = 61/86 (70%), Positives = 74/86 (86%)
 Frame = -2

Query: 283 PSLRWDYPKVEHLVDFLTYNMQWEPSYIRQRLLPMLSTIYLREMASAQNRNMLLYDQYEF 104
           P L W+ P +E LVDFL++   WEP+YIRQR+LPMLSTIYLREMAS+Q+++ LLYDQY+F
Sbjct: 381 PLLTWNKPDMEILVDFLSFKQNWEPAYIRQRMLPMLSTIYLREMASSQSKSFLLYDQYKF 440

Query: 103 HSIQRVKIRYGHRYYLVKWKRTTDSV 26
           HSIQR+KIRYGH YYLVKWKR T S+
Sbjct: 441 HSIQRIKIRYGHPYYLVKWKRVTRSM 466


>gb|EAZ09797.1| hypothetical protein OsI_32084 [Oryza sativa Indica Group]
          Length = 630

 Score =  136 bits (342), Expect = 2e-30
 Identities = 61/86 (70%), Positives = 74/86 (86%)
 Frame = -2

Query: 283 PSLRWDYPKVEHLVDFLTYNMQWEPSYIRQRLLPMLSTIYLREMASAQNRNMLLYDQYEF 104
           P L W+ P +E LVDFL++   WEP+YIRQR+LPMLSTIYLREMAS+Q+++ LLYDQY+F
Sbjct: 382 PLLTWNKPDMEILVDFLSFKQNWEPAYIRQRMLPMLSTIYLREMASSQSKSFLLYDQYKF 441

Query: 103 HSIQRVKIRYGHRYYLVKWKRTTDSV 26
           HSIQR+KIRYGH YYLVKWKR T S+
Sbjct: 442 HSIQRIKIRYGHPYYLVKWKRVTRSM 467


>ref|XP_003578463.1| PREDICTED: flap endonuclease GEN-like 1-like [Brachypodium
           distachyon]
          Length = 639

 Score =  131 bits (330), Expect = 5e-29
 Identities = 61/86 (70%), Positives = 71/86 (82%)
 Frame = -2

Query: 283 PSLRWDYPKVEHLVDFLTYNMQWEPSYIRQRLLPMLSTIYLREMASAQNRNMLLYDQYEF 104
           P LRWD P VE LVDFL Y  +WEPSYIRQ +LPMLSTIYLRE+AS+  + +LLYDQYEF
Sbjct: 384 PLLRWDEPNVEALVDFLAYMQKWEPSYIRQHMLPMLSTIYLREVASSPCKLLLLYDQYEF 443

Query: 103 HSIQRVKIRYGHRYYLVKWKRTTDSV 26
            SI+R+KIRYGH YYLVKWKR + S+
Sbjct: 444 LSIERIKIRYGHPYYLVKWKRASSSM 469


>gb|ABG73449.1| DNA repair protein [Oryza brachyantha]
          Length = 629

 Score =  130 bits (326), Expect = 1e-28
 Identities = 61/84 (72%), Positives = 72/84 (85%)
 Frame = -2

Query: 280 SLRWDYPKVEHLVDFLTYNMQWEPSYIRQRLLPMLSTIYLREMASAQNRNMLLYDQYEFH 101
           SL+W+ P VE LVDFL++   WEP+YIRQR+LPMLSTIYLREMAS+ +++  LYDQYEFH
Sbjct: 381 SLKWNKPDVEVLVDFLSFKQNWEPAYIRQRMLPMLSTIYLREMASSPSKS-FLYDQYEFH 439

Query: 100 SIQRVKIRYGHRYYLVKWKRTTDS 29
           SIQR+KIRYGH YYLVKWKR T S
Sbjct: 440 SIQRIKIRYGHPYYLVKWKRFTRS 463


>gb|AAY32559.1| single strand DNA repair-like protein [Triticum monococcum]
          Length = 646

 Score =  123 bits (308), Expect = 2e-26
 Identities = 55/84 (65%), Positives = 67/84 (79%)
 Frame = -2

Query: 277 LRWDYPKVEHLVDFLTYNMQWEPSYIRQRLLPMLSTIYLREMASAQNRNMLLYDQYEFHS 98
           L W  PKV+ LVD LTY   WEPSY+RQ +LPMLSTIYLR MAS+  +++LL DQYEFHS
Sbjct: 387 LEWTEPKVDDLVDLLTYMQNWEPSYVRQHMLPMLSTIYLRRMASSPCKSLLLCDQYEFHS 446

Query: 97  IQRVKIRYGHRYYLVKWKRTTDSV 26
           IQR+KI++G+ YYLVKWKR T  +
Sbjct: 447 IQRIKIKHGYPYYLVKWKRATGGI 470


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