BLASTX nr result

ID: Dioscorea21_contig00037832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037832
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsu...   146   2e-33
ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containi...   142   2e-32
emb|CBI31119.3| unnamed protein product [Vitis vinifera]              142   2e-32
ref|XP_002526196.1| pentatricopeptide repeat-containing protein,...   135   3e-30
ref|XP_002327460.1| predicted protein [Populus trichocarpa] gi|2...   130   8e-29

>gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
           gi|227462998|gb|ACP39951.1| pentatricopeptide repeat
           protein [Gossypium hirsutum]
          Length = 532

 Score =  146 bits (368), Expect = 2e-33
 Identities = 70/91 (76%), Positives = 81/91 (89%)
 Frame = +1

Query: 1   PRVEHYGGFVDLLSRAGFLEEARRVVLEMPMEPDPYVLGALLNACRVHGEVELGKETVES 180
           P V+HYG  VDLL RAG LEEA+R+V EMPMEPD YVLGALLN+CRVHG+VELGKETVES
Sbjct: 375 PGVQHYGCMVDLLGRAGLLEEAKRLVREMPMEPDSYVLGALLNSCRVHGDVELGKETVES 434

Query: 181 LVKLGIDHSGVHVLLSNMHASADQWEEVVKV 273
           LV+ G+DH GVHVLLSNM+AS++QW+ VVKV
Sbjct: 435 LVERGLDHGGVHVLLSNMYASSNQWDWVVKV 465


>ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 537

 Score =  142 bits (359), Expect = 2e-32
 Identities = 68/91 (74%), Positives = 78/91 (85%)
 Frame = +1

Query: 1   PRVEHYGGFVDLLSRAGFLEEARRVVLEMPMEPDPYVLGALLNACRVHGEVELGKETVES 180
           P V+HYG  VDLL RAG LE+A+RVV EMP+EPD YVLGALLNACRVHG+VELGKETVE 
Sbjct: 380 PVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVELGKETVEC 439

Query: 181 LVKLGIDHSGVHVLLSNMHASADQWEEVVKV 273
           L +  +DH GVHVLLSNM+ASA+QWE+V KV
Sbjct: 440 LAERSLDHGGVHVLLSNMYASANQWEDVAKV 470


>emb|CBI31119.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score =  142 bits (359), Expect = 2e-32
 Identities = 68/91 (74%), Positives = 78/91 (85%)
 Frame = +1

Query: 1   PRVEHYGGFVDLLSRAGFLEEARRVVLEMPMEPDPYVLGALLNACRVHGEVELGKETVES 180
           P V+HYG  VDLL RAG LE+A+RVV EMP+EPD YVLGALLNACRVHG+VELGKETVE 
Sbjct: 355 PVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVELGKETVEC 414

Query: 181 LVKLGIDHSGVHVLLSNMHASADQWEEVVKV 273
           L +  +DH GVHVLLSNM+ASA+QWE+V KV
Sbjct: 415 LAERSLDHGGVHVLLSNMYASANQWEDVAKV 445


>ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534500|gb|EEF36200.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 491

 Score =  135 bits (341), Expect = 3e-30
 Identities = 64/91 (70%), Positives = 81/91 (89%)
 Frame = +1

Query: 1   PRVEHYGGFVDLLSRAGFLEEARRVVLEMPMEPDPYVLGALLNACRVHGEVELGKETVES 180
           P+V+HYG  VDLL RAG LEEA+++V EMPM+PD YVLGALLNA RV+G+VELG+ETVES
Sbjct: 378 PQVQHYGCLVDLLGRAGKLEEAKKLVKEMPMKPDSYVLGALLNASRVYGDVELGEETVES 437

Query: 181 LVKLGIDHSGVHVLLSNMHASADQWEEVVKV 273
           L +L +DHSGVHV+LSNM+ASA++W+EV +V
Sbjct: 438 LAQLSLDHSGVHVVLSNMYASANKWDEVARV 468


>ref|XP_002327460.1| predicted protein [Populus trichocarpa] gi|222836014|gb|EEE74435.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  130 bits (328), Expect = 8e-29
 Identities = 59/91 (64%), Positives = 78/91 (85%)
 Frame = +1

Query: 1   PRVEHYGGFVDLLSRAGFLEEARRVVLEMPMEPDPYVLGALLNACRVHGEVELGKETVES 180
           P+++HYG  VDLL RAG +EEA++VV EMP++PD Y LGALL+ACRVHG+V+LG+E V+S
Sbjct: 379 PQIQHYGCLVDLLGRAGKIEEAKQVVREMPLQPDSYTLGALLDACRVHGDVQLGEEMVDS 438

Query: 181 LVKLGIDHSGVHVLLSNMHASADQWEEVVKV 273
           LV+  +DH GVHVLLSNM+ASAD+WE+  K+
Sbjct: 439 LVQRCLDHGGVHVLLSNMYASADKWEDASKI 469


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