BLASTX nr result

ID: Dioscorea21_contig00037830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037830
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat...   119   3e-25
emb|CBI23791.3| unnamed protein product [Vitis vinifera]              119   3e-25
ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat...   113   2e-23
ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containi...   113   2e-23
gb|ACE80806.1| pentatricopeptide repeat protein [Picea abies]         105   5e-21

>ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 689

 Score =  119 bits (297), Expect = 3e-25
 Identities = 61/87 (70%), Positives = 68/87 (78%)
 Frame = +2

Query: 2   EINGKIHAFFEGDKSHPQSRQIQILLENLDKKMKAAGYVPDTRFVLHDISEEEKECSLKT 181
           EINGK H F   DKSHPQ+++I   LE L +K+K AGY+PDT FVLHDISEEEKE +L T
Sbjct: 561 EINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEEEKEYNLTT 620

Query: 182 HSEKLAIAFGLLNASPGTVRVLRVTKN 262
           HSEKLAIAFGLLN  PG   VLRVTKN
Sbjct: 621 HSEKLAIAFGLLNTRPGV--VLRVTKN 645


>emb|CBI23791.3| unnamed protein product [Vitis vinifera]
          Length = 615

 Score =  119 bits (297), Expect = 3e-25
 Identities = 61/87 (70%), Positives = 68/87 (78%)
 Frame = +2

Query: 2   EINGKIHAFFEGDKSHPQSRQIQILLENLDKKMKAAGYVPDTRFVLHDISEEEKECSLKT 181
           EINGK H F   DKSHPQ+++I   LE L +K+K AGY+PDT FVLHDISEEEKE +L T
Sbjct: 487 EINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEEEKEYNLTT 546

Query: 182 HSEKLAIAFGLLNASPGTVRVLRVTKN 262
           HSEKLAIAFGLLN  PG   VLRVTKN
Sbjct: 547 HSEKLAIAFGLLNTRPGV--VLRVTKN 571


>ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 642

 Score =  113 bits (282), Expect = 2e-23
 Identities = 58/87 (66%), Positives = 66/87 (75%)
 Frame = +2

Query: 2   EINGKIHAFFEGDKSHPQSRQIQILLENLDKKMKAAGYVPDTRFVLHDISEEEKECSLKT 181
           EINGK H F  GD SHPQ ++I + LE L +KMKAAGY PDT +VLHDISEEEKE +L  
Sbjct: 514 EINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIA 573

Query: 182 HSEKLAIAFGLLNASPGTVRVLRVTKN 262
           HSEKLA+AFG+LN    T  VLRVTKN
Sbjct: 574 HSEKLAVAFGILNTPAET--VLRVTKN 598


>ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Cucumis sativus]
          Length = 679

 Score =  113 bits (282), Expect = 2e-23
 Identities = 58/87 (66%), Positives = 66/87 (75%)
 Frame = +2

Query: 2   EINGKIHAFFEGDKSHPQSRQIQILLENLDKKMKAAGYVPDTRFVLHDISEEEKECSLKT 181
           EINGK H F  GD SHPQ ++I + LE L +KMKAAGY PDT +VLHDISEEEKE +L  
Sbjct: 551 EINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIA 610

Query: 182 HSEKLAIAFGLLNASPGTVRVLRVTKN 262
           HSEKLA+AFG+LN    T  VLRVTKN
Sbjct: 611 HSEKLAVAFGILNTPAET--VLRVTKN 635


>gb|ACE80806.1| pentatricopeptide repeat protein [Picea abies]
          Length = 152

 Score =  105 bits (261), Expect = 5e-21
 Identities = 51/87 (58%), Positives = 63/87 (72%)
 Frame = +2

Query: 2   EINGKIHAFFEGDKSHPQSRQIQILLENLDKKMKAAGYVPDTRFVLHDISEEEKECSLKT 181
           E+N  +H F  GD+SHPQ++ I   LE L ++MK AGYVP TRFVLHD+ EE+KE  L  
Sbjct: 31  EVNKHVHVFLVGDRSHPQTQDIYAELERLSRQMKTAGYVPGTRFVLHDVEEEQKEQILCH 90

Query: 182 HSEKLAIAFGLLNASPGTVRVLRVTKN 262
           HSEKLAIAFGL+N  PGT   +R+ KN
Sbjct: 91  HSEKLAIAFGLINTPPGT--TIRIIKN 115


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