BLASTX nr result
ID: Dioscorea21_contig00037830
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00037830 (262 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat... 119 3e-25 emb|CBI23791.3| unnamed protein product [Vitis vinifera] 119 3e-25 ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat... 113 2e-23 ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containi... 113 2e-23 gb|ACE80806.1| pentatricopeptide repeat protein [Picea abies] 105 5e-21 >ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein At3g49142-like [Vitis vinifera] Length = 689 Score = 119 bits (297), Expect = 3e-25 Identities = 61/87 (70%), Positives = 68/87 (78%) Frame = +2 Query: 2 EINGKIHAFFEGDKSHPQSRQIQILLENLDKKMKAAGYVPDTRFVLHDISEEEKECSLKT 181 EINGK H F DKSHPQ+++I LE L +K+K AGY+PDT FVLHDISEEEKE +L T Sbjct: 561 EINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEEEKEYNLTT 620 Query: 182 HSEKLAIAFGLLNASPGTVRVLRVTKN 262 HSEKLAIAFGLLN PG VLRVTKN Sbjct: 621 HSEKLAIAFGLLNTRPGV--VLRVTKN 645 >emb|CBI23791.3| unnamed protein product [Vitis vinifera] Length = 615 Score = 119 bits (297), Expect = 3e-25 Identities = 61/87 (70%), Positives = 68/87 (78%) Frame = +2 Query: 2 EINGKIHAFFEGDKSHPQSRQIQILLENLDKKMKAAGYVPDTRFVLHDISEEEKECSLKT 181 EINGK H F DKSHPQ+++I LE L +K+K AGY+PDT FVLHDISEEEKE +L T Sbjct: 487 EINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEEEKEYNLTT 546 Query: 182 HSEKLAIAFGLLNASPGTVRVLRVTKN 262 HSEKLAIAFGLLN PG VLRVTKN Sbjct: 547 HSEKLAIAFGLLNTRPGV--VLRVTKN 571 >ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein At3g23330-like [Cucumis sativus] Length = 642 Score = 113 bits (282), Expect = 2e-23 Identities = 58/87 (66%), Positives = 66/87 (75%) Frame = +2 Query: 2 EINGKIHAFFEGDKSHPQSRQIQILLENLDKKMKAAGYVPDTRFVLHDISEEEKECSLKT 181 EINGK H F GD SHPQ ++I + LE L +KMKAAGY PDT +VLHDISEEEKE +L Sbjct: 514 EINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIA 573 Query: 182 HSEKLAIAFGLLNASPGTVRVLRVTKN 262 HSEKLA+AFG+LN T VLRVTKN Sbjct: 574 HSEKLAVAFGILNTPAET--VLRVTKN 598 >ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230-like [Cucumis sativus] Length = 679 Score = 113 bits (282), Expect = 2e-23 Identities = 58/87 (66%), Positives = 66/87 (75%) Frame = +2 Query: 2 EINGKIHAFFEGDKSHPQSRQIQILLENLDKKMKAAGYVPDTRFVLHDISEEEKECSLKT 181 EINGK H F GD SHPQ ++I + LE L +KMKAAGY PDT +VLHDISEEEKE +L Sbjct: 551 EINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIA 610 Query: 182 HSEKLAIAFGLLNASPGTVRVLRVTKN 262 HSEKLA+AFG+LN T VLRVTKN Sbjct: 611 HSEKLAVAFGILNTPAET--VLRVTKN 635 >gb|ACE80806.1| pentatricopeptide repeat protein [Picea abies] Length = 152 Score = 105 bits (261), Expect = 5e-21 Identities = 51/87 (58%), Positives = 63/87 (72%) Frame = +2 Query: 2 EINGKIHAFFEGDKSHPQSRQIQILLENLDKKMKAAGYVPDTRFVLHDISEEEKECSLKT 181 E+N +H F GD+SHPQ++ I LE L ++MK AGYVP TRFVLHD+ EE+KE L Sbjct: 31 EVNKHVHVFLVGDRSHPQTQDIYAELERLSRQMKTAGYVPGTRFVLHDVEEEQKEQILCH 90 Query: 182 HSEKLAIAFGLLNASPGTVRVLRVTKN 262 HSEKLAIAFGL+N PGT +R+ KN Sbjct: 91 HSEKLAIAFGLINTPPGT--TIRIIKN 115