BLASTX nr result

ID: Dioscorea21_contig00037821 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037821
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002443319.1| hypothetical protein SORBIDRAFT_08g017445 [S...    67   1e-09
gb|ABA97681.2| retrotransposon protein, putative, unclassified, ...    67   1e-09
emb|CAE01835.2| OSJNBa0064M23.8 [Oryza sativa Japonica Group]          67   1e-09
emb|CAE05084.3| OSJNBa0009K15.4 [Oryza sativa Japonica Group]          67   2e-09
gb|AAL77136.1|AC097447_2 Putative non-LTR retroelement reverse t...    66   3e-09

>ref|XP_002443319.1| hypothetical protein SORBIDRAFT_08g017445 [Sorghum bicolor]
           gi|241944012|gb|EES17157.1| hypothetical protein
           SORBIDRAFT_08g017445 [Sorghum bicolor]
          Length = 205

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 29/65 (44%), Positives = 44/65 (67%)
 Frame = +2

Query: 11  DLPQVSESEGETLIREVTKQKVRDTLFSLPSGKSPGPDGFNVEFYRYYWNEIGEDHMNIS 190
           D+PQVS+ E + LIR  T+ +VRD +F +   K+PGPDGF  EF++ +W  I ED   + 
Sbjct: 106 DIPQVSQEENDILIRPFTESEVRDAIFQMEHNKAPGPDGFPAEFFQVFWGIIKED---LL 162

Query: 191 HIFSD 205
           H+F++
Sbjct: 163 HLFAE 167


>gb|ABA97681.2| retrotransposon protein, putative, unclassified, expressed [Oryza
           sativa Japonica Group]
          Length = 1047

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 28/65 (43%), Positives = 46/65 (70%)
 Frame = +2

Query: 14  LPQVSESEGETLIREVTKQKVRDTLFSLPSGKSPGPDGFNVEFYRYYWNEIGEDHMNISH 193
           +PQVS+ E E LI++ T+++++D +F +   K+PGPDGF  EFY+ +W+ I +D +N   
Sbjct: 800 IPQVSQLENEALIQDFTEKEIKDAIFQMEHNKAPGPDGFPAEFYQVFWDVIKDDLLN--- 856

Query: 194 IFSDF 208
           +F DF
Sbjct: 857 LFRDF 861


>emb|CAE01835.2| OSJNBa0064M23.8 [Oryza sativa Japonica Group]
          Length = 239

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 29/66 (43%), Positives = 45/66 (68%)
 Frame = +2

Query: 11  DLPQVSESEGETLIREVTKQKVRDTLFSLPSGKSPGPDGFNVEFYRYYWNEIGEDHMNIS 190
           D+PQVS+ E E LI+E TK+++++ +F +   K+PGPDGF  EFY+ +WN I     ++ 
Sbjct: 90  DIPQVSQLENEALIQEFTKKEIKEAIFQMEHNKAPGPDGFPAEFYQVFWNVI----KDML 145

Query: 191 HIFSDF 208
            +F DF
Sbjct: 146 DLFRDF 151


>emb|CAE05084.3| OSJNBa0009K15.4 [Oryza sativa Japonica Group]
          Length = 332

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 26/60 (43%), Positives = 42/60 (70%)
 Frame = +2

Query: 8   DDLPQVSESEGETLIREVTKQKVRDTLFSLPSGKSPGPDGFNVEFYRYYWNEIGEDHMNI 187
           DD+PQVS+ E E L +E T+ ++++ +F +   K+PGPDGF  EFY+ +WN I  D +++
Sbjct: 41  DDIPQVSQLENEALTQEFTENEIKEAIFQMEHNKAPGPDGFPAEFYQVFWNVIKADLLDL 100


>gb|AAL77136.1|AC097447_2 Putative non-LTR retroelement reverse transcriptase [Oryza sativa
           Japonica Group] gi|31430307|gb|AAP52241.1|
           retrotransposon protein, putative, unclassified [Oryza
           sativa Japonica Group]
          Length = 379

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 29/66 (43%), Positives = 43/66 (65%)
 Frame = +2

Query: 11  DLPQVSESEGETLIREVTKQKVRDTLFSLPSGKSPGPDGFNVEFYRYYWNEIGEDHMNIS 190
           D+PQVS+ E E L ++ T+ +V+D +F +   K+PGPDGF  EFY+ +WN I  D   + 
Sbjct: 91  DIPQVSQLENEALTKDFTENEVKDAIFQMEHNKAPGPDGFPAEFYQVFWNVIKFD---LL 147

Query: 191 HIFSDF 208
            +F DF
Sbjct: 148 ELFKDF 153


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