BLASTX nr result

ID: Dioscorea21_contig00037817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037817
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF70017.1| WD-40 repeat family protein [Musa acuminata]           197   1e-48
ref|XP_002268809.1| PREDICTED: uncharacterized WD repeat-contain...   192   2e-47
emb|CAN66843.1| hypothetical protein VITISV_002364 [Vitis vinifera]   192   2e-47
ref|XP_002519123.1| F-box and wd40 domain protein, putative [Ric...   187   6e-46
ref|XP_002283775.1| PREDICTED: vegetative incompatibility protei...   187   1e-45

>gb|ABF70017.1| WD-40 repeat family protein [Musa acuminata]
          Length = 465

 Score =  197 bits (500), Expect = 1e-48
 Identities = 95/117 (81%), Positives = 109/117 (93%), Gaps = 1/117 (0%)
 Frame = +3

Query: 27  DPTA-GLLGSLVREEGHVYSLAASGELLYTGSDSKNIRVWKGRKEFSGFKSNRGLVKAIV 203
           DP+A GL+GSLVREEGHVYSLA++G++LYTGSDS+NIRVWKGR+E SGFKS+ GLVKAIV
Sbjct: 64  DPSATGLVGSLVREEGHVYSLASAGDILYTGSDSRNIRVWKGRRELSGFKSSSGLVKAIV 123

Query: 204 VAGDRIFTGHQDGKIRIWRVSSKDPTVHKRVGTLPSLKDWLKSSINPNSYVRVRRHR 374
           VAGDRIFTGHQDGKIRIW+ SSK+P VH+RVGTLP LKD LKSSINP++YV VRRHR
Sbjct: 124 VAGDRIFTGHQDGKIRIWKTSSKNPAVHRRVGTLPRLKDLLKSSINPSNYVEVRRHR 180


>ref|XP_002268809.1| PREDICTED: uncharacterized WD repeat-containing protein
           alr3466-like [Vitis vinifera]
          Length = 451

 Score =  192 bits (488), Expect = 2e-47
 Identities = 85/112 (75%), Positives = 107/112 (95%)
 Frame = +3

Query: 39  GLLGSLVREEGHVYSLAASGELLYTGSDSKNIRVWKGRKEFSGFKSNRGLVKAIVVAGDR 218
           GL+GSLVREEGH+YSLA SG+LLYTGSDSKNIRVWK +KEFSGFKSN GLVKAI+++G++
Sbjct: 79  GLMGSLVREEGHIYSLATSGDLLYTGSDSKNIRVWKNQKEFSGFKSNSGLVKAIIISGEK 138

Query: 219 IFTGHQDGKIRIWRVSSKDPTVHKRVGTLPSLKDWLKSSINPNSYVRVRRHR 374
           IFTGHQDGKIR+W+VS+K+P+VHKRVGTLP+ +D+++SS+NP++YV VRRHR
Sbjct: 139 IFTGHQDGKIRVWKVSAKNPSVHKRVGTLPTFRDYIRSSMNPSNYVEVRRHR 190


>emb|CAN66843.1| hypothetical protein VITISV_002364 [Vitis vinifera]
          Length = 511

 Score =  192 bits (488), Expect = 2e-47
 Identities = 85/112 (75%), Positives = 107/112 (95%)
 Frame = +3

Query: 39  GLLGSLVREEGHVYSLAASGELLYTGSDSKNIRVWKGRKEFSGFKSNRGLVKAIVVAGDR 218
           GL+GSLVREEGH+YSLA SG+LLYTGSDSKNIRVWK +KEFSGFKSN GLVKAI+++G++
Sbjct: 139 GLMGSLVREEGHIYSLATSGDLLYTGSDSKNIRVWKNQKEFSGFKSNSGLVKAIIISGEK 198

Query: 219 IFTGHQDGKIRIWRVSSKDPTVHKRVGTLPSLKDWLKSSINPNSYVRVRRHR 374
           IFTGHQDGKIR+W+VS+K+P+VHKRVGTLP+ +D+++SS+NP++YV VRRHR
Sbjct: 199 IFTGHQDGKIRVWKVSAKNPSVHKRVGTLPTFRDYIRSSMNPSNYVEVRRHR 250


>ref|XP_002519123.1| F-box and wd40 domain protein, putative [Ricinus communis]
           gi|223541786|gb|EEF43334.1| F-box and wd40 domain
           protein, putative [Ricinus communis]
          Length = 448

 Score =  187 bits (476), Expect = 6e-46
 Identities = 85/112 (75%), Positives = 102/112 (91%)
 Frame = +3

Query: 39  GLLGSLVREEGHVYSLAASGELLYTGSDSKNIRVWKGRKEFSGFKSNRGLVKAIVVAGDR 218
           GL+GS+VREEGHVYSLAASGELLYTGSDSKNIRVW+  KEFSGFKSN GLVKAIV+ GDR
Sbjct: 101 GLVGSIVREEGHVYSLAASGELLYTGSDSKNIRVWRNMKEFSGFKSNSGLVKAIVILGDR 160

Query: 219 IFTGHQDGKIRIWRVSSKDPTVHKRVGTLPSLKDWLKSSINPNSYVRVRRHR 374
           IFTGH+DGKIRIW++S+K+P+VHKR+G LP+ +D++  S+NP +YV VRRHR
Sbjct: 161 IFTGHRDGKIRIWKISAKNPSVHKRIGGLPTFRDYITKSVNPKNYVEVRRHR 212


>ref|XP_002283775.1| PREDICTED: vegetative incompatibility protein HET-E-1-like [Vitis
           vinifera]
          Length = 456

 Score =  187 bits (474), Expect = 1e-45
 Identities = 88/115 (76%), Positives = 102/115 (88%)
 Frame = +3

Query: 30  PTAGLLGSLVREEGHVYSLAASGELLYTGSDSKNIRVWKGRKEFSGFKSNRGLVKAIVVA 209
           P  GL+GSL REEGH+YSLAA+GELLYTGSDSKNIRVWK  KEFSGFKSN GLVKAIV++
Sbjct: 83  PQNGLIGSLTREEGHIYSLAATGELLYTGSDSKNIRVWKNLKEFSGFKSNSGLVKAIVIS 142

Query: 210 GDRIFTGHQDGKIRIWRVSSKDPTVHKRVGTLPSLKDWLKSSINPNSYVRVRRHR 374
           G++IFTGHQDGKIR+W+VS K+ +VHKR GTLP+LKD  KSSINP++YV VRR R
Sbjct: 143 GEKIFTGHQDGKIRVWKVSPKNASVHKRAGTLPTLKDIFKSSINPSNYVEVRRRR 197


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