BLASTX nr result

ID: Dioscorea21_contig00037794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037794
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ...   186   1e-45
ref|XP_004160105.1| PREDICTED: DNA polymerase epsilon catalytic ...   186   2e-45
ref|XP_004145799.1| PREDICTED: DNA polymerase epsilon catalytic ...   186   2e-45
dbj|BAD23092.1| putative DNA polymerase epsilon catalytic subuni...   183   1e-44
ref|XP_003572557.1| PREDICTED: DNA polymerase epsilon catalytic ...   183   1e-44

>ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
           vinifera]
          Length = 2214

 Score =  186 bits (473), Expect = 1e-45
 Identities = 88/97 (90%), Positives = 95/97 (97%)
 Frame = -2

Query: 293 IPMPPDEVLRKGSGTLCEMLLMVQAHKANVICPNKHQADPEKFYNNRLLESETYIGGHVE 114
           IPMPPDEVLRKGSGTLCEMLLMVQA+KANVICPNKHQ+DPEKFY+N+LLESETYIGGHVE
Sbjct: 458 IPMPPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYHNQLLESETYIGGHVE 517

Query: 113 CLESGVFRSDLPTKFQLDPSAFEQLIRNLDRDLQYAI 3
           CLESGVFRSDLPT F+LDPS++EQLI NLDRDLQYAI
Sbjct: 518 CLESGVFRSDLPTSFKLDPSSYEQLIVNLDRDLQYAI 554


>ref|XP_004160105.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like, partial
           [Cucumis sativus]
          Length = 2051

 Score =  186 bits (471), Expect = 2e-45
 Identities = 87/97 (89%), Positives = 94/97 (96%)
 Frame = -2

Query: 293 IPMPPDEVLRKGSGTLCEMLLMVQAHKANVICPNKHQADPEKFYNNRLLESETYIGGHVE 114
           IPM PDEVLRKGSGTLCEMLLMVQA+KANV+CPNKHQ+DPEKFY+NRLLESETYIGGHVE
Sbjct: 459 IPMSPDEVLRKGSGTLCEMLLMVQAYKANVVCPNKHQSDPEKFYSNRLLESETYIGGHVE 518

Query: 113 CLESGVFRSDLPTKFQLDPSAFEQLIRNLDRDLQYAI 3
           CLESGVFRSDLPT F+LDPSA++QLI NLDRDLQYAI
Sbjct: 519 CLESGVFRSDLPTSFRLDPSAYDQLINNLDRDLQYAI 555


>ref|XP_004145799.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Cucumis
           sativus]
          Length = 2206

 Score =  186 bits (471), Expect = 2e-45
 Identities = 87/97 (89%), Positives = 94/97 (96%)
 Frame = -2

Query: 293 IPMPPDEVLRKGSGTLCEMLLMVQAHKANVICPNKHQADPEKFYNNRLLESETYIGGHVE 114
           IPM PDEVLRKGSGTLCEMLLMVQA+KANV+CPNKHQ+DPEKFY+NRLLESETYIGGHVE
Sbjct: 459 IPMSPDEVLRKGSGTLCEMLLMVQAYKANVVCPNKHQSDPEKFYSNRLLESETYIGGHVE 518

Query: 113 CLESGVFRSDLPTKFQLDPSAFEQLIRNLDRDLQYAI 3
           CLESGVFRSDLPT F+LDPSA++QLI NLDRDLQYAI
Sbjct: 519 CLESGVFRSDLPTSFRLDPSAYDQLINNLDRDLQYAI 555


>dbj|BAD23092.1| putative DNA polymerase epsilon catalytic subunit protein isoform b
           [Oryza sativa Japonica Group]
          Length = 2257

 Score =  183 bits (465), Expect = 1e-44
 Identities = 89/97 (91%), Positives = 92/97 (94%)
 Frame = -2

Query: 293 IPMPPDEVLRKGSGTLCEMLLMVQAHKANVICPNKHQADPEKFYNNRLLESETYIGGHVE 114
           IPM PDEVLRKGSGTLCEMLLMVQA KAN+ICPNKHQAD EKFYNNRLLESETYIGGHVE
Sbjct: 510 IPMSPDEVLRKGSGTLCEMLLMVQAFKANIICPNKHQADLEKFYNNRLLESETYIGGHVE 569

Query: 113 CLESGVFRSDLPTKFQLDPSAFEQLIRNLDRDLQYAI 3
           CLE+GVFRSDLPTKFQL+PSA EQLI NLDRDLQYAI
Sbjct: 570 CLETGVFRSDLPTKFQLEPSACEQLIANLDRDLQYAI 606


>ref|XP_003572557.1| PREDICTED: DNA polymerase epsilon catalytic subunit A [Brachypodium
           distachyon]
          Length = 2127

 Score =  183 bits (465), Expect = 1e-44
 Identities = 87/97 (89%), Positives = 93/97 (95%)
 Frame = -2

Query: 293 IPMPPDEVLRKGSGTLCEMLLMVQAHKANVICPNKHQADPEKFYNNRLLESETYIGGHVE 114
           IPM PDEVLRKGSGTLCEMLLMVQA KAN+ICPNKHQAD EKFYNNRL+ESETYIGGHVE
Sbjct: 485 IPMSPDEVLRKGSGTLCEMLLMVQAFKANIICPNKHQADLEKFYNNRLVESETYIGGHVE 544

Query: 113 CLESGVFRSDLPTKFQLDPSAFEQLIRNLDRDLQYAI 3
           CLE+GVFRSDLPTKFQL+PSA+EQLI NLDRDLQY+I
Sbjct: 545 CLETGVFRSDLPTKFQLEPSAYEQLIENLDRDLQYSI 581


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