BLASTX nr result

ID: Dioscorea21_contig00037772 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037772
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containi...   122   4e-26
emb|CBI30808.3| unnamed protein product [Vitis vinifera]              122   4e-26
ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containi...   114   8e-24
ref|XP_002331875.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24
ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containi...   112   3e-23

>ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial [Vitis vinifera]
          Length = 676

 Score =  122 bits (305), Expect = 4e-26
 Identities = 56/78 (71%), Positives = 67/78 (85%)
 Frame = +2

Query: 2   GNRTHPMSKEIYKKLEWLSGKLKECGFESDKRYALHDVDDEQKEAALAYHSEKLAVTFGL 181
           G+R+HP S  IY+KLEWL GKLKE G+  D+R+ALHDV+DEQKE  L+YHSE+LA+ FGL
Sbjct: 559 GDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGL 618

Query: 182 LSTVEGSTIRVMKNLRVC 235
           +STVEGSTI VMKNLRVC
Sbjct: 619 ISTVEGSTITVMKNLRVC 636


>emb|CBI30808.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  122 bits (305), Expect = 4e-26
 Identities = 56/78 (71%), Positives = 67/78 (85%)
 Frame = +2

Query: 2   GNRTHPMSKEIYKKLEWLSGKLKECGFESDKRYALHDVDDEQKEAALAYHSEKLAVTFGL 181
           G+R+HP S  IY+KLEWL GKLKE G+  D+R+ALHDV+DEQKE  L+YHSE+LA+ FGL
Sbjct: 543 GDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGL 602

Query: 182 LSTVEGSTIRVMKNLRVC 235
           +STVEGSTI VMKNLRVC
Sbjct: 603 ISTVEGSTITVMKNLRVC 620


>ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Cucumis sativus]
           gi|449533166|ref|XP_004173548.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Cucumis sativus]
          Length = 712

 Score =  114 bits (285), Expect = 8e-24
 Identities = 50/78 (64%), Positives = 67/78 (85%)
 Frame = +2

Query: 2   GNRTHPMSKEIYKKLEWLSGKLKECGFESDKRYALHDVDDEQKEAALAYHSEKLAVTFGL 181
           G+++HP+S++IY+KLEWL GKLKE G+  D +++ HDV+ EQKE  L+YHSE+LA+ FGL
Sbjct: 595 GDQSHPLSRKIYQKLEWLGGKLKELGYVPDPKFSFHDVETEQKEEMLSYHSERLAIGFGL 654

Query: 182 LSTVEGSTIRVMKNLRVC 235
           +STVEGSTI VMKNLR+C
Sbjct: 655 ISTVEGSTIIVMKNLRIC 672


>ref|XP_002331875.1| predicted protein [Populus trichocarpa] gi|222875393|gb|EEF12524.1|
           predicted protein [Populus trichocarpa]
          Length = 675

 Score =  114 bits (285), Expect = 8e-24
 Identities = 51/77 (66%), Positives = 67/77 (87%)
 Frame = +2

Query: 5   NRTHPMSKEIYKKLEWLSGKLKECGFESDKRYALHDVDDEQKEAALAYHSEKLAVTFGLL 184
           +R+HP+S+ IY+KL+WL  KLKE G+  D+++ALHDV+DEQKE  L++HSE+LA+ FGL+
Sbjct: 559 DRSHPLSERIYEKLDWLGKKLKEFGYVPDQKFALHDVEDEQKEEMLSFHSERLAIAFGLV 618

Query: 185 STVEGSTIRVMKNLRVC 235
           STVEGSTI VMKNLRVC
Sbjct: 619 STVEGSTITVMKNLRVC 635


>ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Glycine max]
          Length = 721

 Score =  112 bits (280), Expect = 3e-23
 Identities = 51/77 (66%), Positives = 66/77 (85%)
 Frame = +2

Query: 5   NRTHPMSKEIYKKLEWLSGKLKECGFESDKRYALHDVDDEQKEAALAYHSEKLAVTFGLL 184
           +R+HP++++IY+KLEWL  KLKE G+  D+++ALHDV+ EQKE  L+YHSE+LA+ FGLL
Sbjct: 605 DRSHPLAEKIYQKLEWLGVKLKELGYVPDQQFALHDVETEQKEEMLSYHSERLAIAFGLL 664

Query: 185 STVEGSTIRVMKNLRVC 235
           STVEGS I VMKNLRVC
Sbjct: 665 STVEGSAITVMKNLRVC 681


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