BLASTX nr result

ID: Dioscorea21_contig00037766 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037766
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624562.1| INO80 complex subunit D [Medicago truncatula...    64   2e-08
ref|XP_002334422.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_002327853.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002514791.1| conserved hypothetical protein [Ricinus comm...    61   8e-08
ref|XP_003548045.1| PREDICTED: uncharacterized protein LOC100812...    61   1e-07

>ref|XP_003624562.1| INO80 complex subunit D [Medicago truncatula]
           gi|355499577|gb|AES80780.1| INO80 complex subunit D
           [Medicago truncatula]
          Length = 233

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 35/88 (39%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
 Frame = +3

Query: 84  PESNPGPMEAIAGEDEDEALKMAXXXXXXXXXXXXXXXXKQLERYYREQYWALMEELRVR 263
           P     PM  I G DED AL  +                +QL R YR  YWALMEEL+ +
Sbjct: 8   PPQQIAPM-TIDGADEDLALAASSVLTRREVLVRRLRRVRQLSRCYRGHYWALMEELKAK 66

Query: 264 HRDYYWEFGKSPF--DGQKGENVVFAAG 341
           +R+YYW +G+SPF  D ++  N V  +G
Sbjct: 67  YREYYWTYGRSPFKEDEERNSNGVRDSG 94


>ref|XP_002334422.1| predicted protein [Populus trichocarpa] gi|222870384|gb|EEF07515.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/100 (31%), Positives = 48/100 (48%)
 Frame = +3

Query: 3   NSSPAPELMKREPPADELPGSPRAIHDPESNPGPMEAIAGEDEDEALKMAXXXXXXXXXX 182
           N    P       P   +  +P    +P +NP P+       +D+ L  A          
Sbjct: 5   NHHSTPNTTTTTTPQPNITQNP----NPTTNPSPLSPTL---KDQVLSRATHITRQELLK 57

Query: 183 XXXXXXKQLERYYREQYWALMEELRVRHRDYYWEFGKSPF 302
                 KQL + +++ YWALMEEL++++R+YYWE+G SPF
Sbjct: 58  RRSYKLKQLSKCFKDHYWALMEELKIQYREYYWEYGVSPF 97


>ref|XP_002327853.1| predicted protein [Populus trichocarpa] gi|222837262|gb|EEE75641.1|
           predicted protein [Populus trichocarpa]
          Length = 287

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/74 (36%), Positives = 42/74 (56%)
 Frame = +3

Query: 81  DPESNPGPMEAIAGEDEDEALKMAXXXXXXXXXXXXXXXXKQLERYYREQYWALMEELRV 260
           +P +NP P+       +D+ L  A                KQL + +++ YWALMEEL++
Sbjct: 40  NPTTNPSPLSPTL---KDQVLSRATHITRQELLKRRSYKLKQLSKCFKDHYWALMEELKI 96

Query: 261 RHRDYYWEFGKSPF 302
           ++R+YYWE+G SPF
Sbjct: 97  QYREYYWEYGVSPF 110


>ref|XP_002514791.1| conserved hypothetical protein [Ricinus communis]
           gi|223545842|gb|EEF47345.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 245

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/73 (39%), Positives = 41/73 (56%)
 Frame = +3

Query: 84  PESNPGPMEAIAGEDEDEALKMAXXXXXXXXXXXXXXXXKQLERYYREQYWALMEELRVR 263
           P+  P P+  I G   D AL ++                KQL + YR  YWALMEEL+ +
Sbjct: 6   PQPPPEPI-TIDGSSIDAALSLSSHLSHEELMARRSRRVKQLAKIYRAHYWALMEELKSK 64

Query: 264 HRDYYWEFGKSPF 302
           +++YYW++GKSPF
Sbjct: 65  YKEYYWKYGKSPF 77


>ref|XP_003548045.1| PREDICTED: uncharacterized protein LOC100812807 [Glycine max]
          Length = 228

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/78 (39%), Positives = 40/78 (51%)
 Frame = +3

Query: 90  SNPGPMEAIAGEDEDEALKMAXXXXXXXXXXXXXXXXKQLERYYREQYWALMEELRVRHR 269
           S+P    AI G + D AL  +                +QL R YR  YWALMEE+R ++R
Sbjct: 8   SSPPRPVAIEGGEGDTALAKSRVLTREEVLRRRLRRTRQLGRCYRAHYWALMEEMRSKYR 67

Query: 270 DYYWEFGKSPFDGQKGEN 323
           DY W +GKSPF     +N
Sbjct: 68  DYSWSYGKSPFKEDHNDN 85


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