BLASTX nr result

ID: Dioscorea21_contig00037752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037752
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_566687.1| uncharacterized protein [Arabidopsis thaliana] ...   103   1e-20
ref|XP_002516830.1| conserved hypothetical protein [Ricinus comm...   103   1e-20
ref|XP_002885448.1| hypothetical protein ARALYDRAFT_898603 [Arab...   103   1e-20
ref|XP_002315542.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19
ref|XP_002312376.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19

>ref|NP_566687.1| uncharacterized protein [Arabidopsis thaliana]
           gi|11994391|dbj|BAB02350.1| unnamed protein product
           [Arabidopsis thaliana] gi|15529149|gb|AAK97669.1|
           AT3g21550/MIL23_11 [Arabidopsis thaliana]
           gi|16974353|gb|AAL31102.1| AT3g21550/MIL23_11
           [Arabidopsis thaliana] gi|332643001|gb|AEE76522.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 184

 Score =  103 bits (258), Expect = 1e-20
 Identities = 46/66 (69%), Positives = 56/66 (84%)
 Frame = -2

Query: 198 MSKTQRSIGDLTFKGFGDLIKLLPTGTVFLFQFLNPLLTNAGHCNTFNKYLSGLLLFVCS 19
           MSKT ++I D T+ G GDLIKLLPTGTVFLFQFLNP+LTN GHC   NKYL+G+L+ +C+
Sbjct: 1   MSKTFKAIRDRTYSGVGDLIKLLPTGTVFLFQFLNPVLTNNGHCLLINKYLTGVLIVICA 60

Query: 18  FSCCFS 1
           FSCCF+
Sbjct: 61  FSCCFT 66


>ref|XP_002516830.1| conserved hypothetical protein [Ricinus communis]
           gi|223543918|gb|EEF45444.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 193

 Score =  103 bits (258), Expect = 1e-20
 Identities = 46/65 (70%), Positives = 57/65 (87%)
 Frame = -2

Query: 195 SKTQRSIGDLTFKGFGDLIKLLPTGTVFLFQFLNPLLTNAGHCNTFNKYLSGLLLFVCSF 16
           SK+++S+ D TF GFG+LIKLLPTGTVF+FQFLNP+LTN GHC+T NKYLSG+L+ +C F
Sbjct: 8   SKSKKSMKDKTFTGFGNLIKLLPTGTVFIFQFLNPVLTNNGHCHTINKYLSGILIGLCGF 67

Query: 15  SCCFS 1
           SC FS
Sbjct: 68  SCAFS 72


>ref|XP_002885448.1| hypothetical protein ARALYDRAFT_898603 [Arabidopsis lyrata subsp.
           lyrata] gi|297331288|gb|EFH61707.1| hypothetical protein
           ARALYDRAFT_898603 [Arabidopsis lyrata subsp. lyrata]
          Length = 185

 Score =  103 bits (257), Expect = 1e-20
 Identities = 47/66 (71%), Positives = 55/66 (83%)
 Frame = -2

Query: 198 MSKTQRSIGDLTFKGFGDLIKLLPTGTVFLFQFLNPLLTNAGHCNTFNKYLSGLLLFVCS 19
           MSKT ++I D T+ G GDLIKLLPTGTVFLFQFLNP+LTN GHC   NKYL+G L+ VC+
Sbjct: 1   MSKTFKAIRDRTYSGVGDLIKLLPTGTVFLFQFLNPVLTNNGHCLLINKYLTGALIVVCA 60

Query: 18  FSCCFS 1
           FSCCF+
Sbjct: 61  FSCCFT 66


>ref|XP_002315542.1| predicted protein [Populus trichocarpa] gi|222864582|gb|EEF01713.1|
           predicted protein [Populus trichocarpa]
          Length = 186

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 44/60 (73%), Positives = 51/60 (85%)
 Frame = -2

Query: 180 SIGDLTFKGFGDLIKLLPTGTVFLFQFLNPLLTNAGHCNTFNKYLSGLLLFVCSFSCCFS 1
           SI D TF G G+LIKLLPTGTVF+FQFLNP+LTN G C+T NKYLSG+L+ +C FSCCFS
Sbjct: 9   SIQDKTFSGVGNLIKLLPTGTVFMFQFLNPVLTNNGQCHTVNKYLSGILMGLCGFSCCFS 68


>ref|XP_002312376.1| predicted protein [Populus trichocarpa] gi|222852196|gb|EEE89743.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 43/62 (69%), Positives = 52/62 (83%)
 Frame = -2

Query: 186 QRSIGDLTFKGFGDLIKLLPTGTVFLFQFLNPLLTNAGHCNTFNKYLSGLLLFVCSFSCC 7
           + SI D TF G G+L+KLLPTGTVF+FQFLNP+LTN G C+T NKYLSG+L+ +C FSCC
Sbjct: 7   ESSIQDKTFSGVGNLVKLLPTGTVFMFQFLNPVLTNNGQCHTVNKYLSGILMGLCGFSCC 66

Query: 6   FS 1
           FS
Sbjct: 67  FS 68


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