BLASTX nr result
ID: Dioscorea21_contig00037717
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00037717 (366 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAH67120.1| H0502G05.11 [Oryza sativa Indica Group] 70 1e-12 emb|CAD41628.3| OSJNBa0091D06.8 [Oryza sativa Japonica Group] 70 1e-12 dbj|BAB08213.2| unnamed protein product [Oryza sativa Japonica G... 69 2e-10 gb|AAK92670.1|AC090714_3 putative gag-pol precursor [Oryza sativ... 68 7e-10 gb|ABF97101.1| retrotransposon protein, putative, unclassified [... 68 7e-10 >emb|CAH67120.1| H0502G05.11 [Oryza sativa Indica Group] Length = 2933 Score = 69.7 bits (169), Expect(2) = 1e-12 Identities = 29/52 (55%), Positives = 41/52 (78%) Frame = -3 Query: 160 GGQATIDELVEINLGSDEDPRPTFLSTQLSKEEKASFKALLKEHIDYFAWTY 5 GGQ TIDELVE+NLG+++DPRP F+S L++EE+ +++ L E+ D F WTY Sbjct: 1835 GGQPTIDELVEMNLGTEDDPRPIFVSAMLTEEEREDYRSFLMEYRDCFTWTY 1886 Score = 27.7 bits (60), Expect(2) = 1e-12 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = -2 Query: 230 YMVTLQEEEEEIKMKNAPLELEDGG 156 + V E EEE+ AP +LEDGG Sbjct: 1812 FQVAAAEVEEELDTMQAPQQLEDGG 1836 >emb|CAD41628.3| OSJNBa0091D06.8 [Oryza sativa Japonica Group] Length = 2657 Score = 69.7 bits (169), Expect(2) = 1e-12 Identities = 29/52 (55%), Positives = 41/52 (78%) Frame = -3 Query: 160 GGQATIDELVEINLGSDEDPRPTFLSTQLSKEEKASFKALLKEHIDYFAWTY 5 GGQ TIDELVE+NLG+++DPRP F+S L++EE+ +++ L E+ D F WTY Sbjct: 1755 GGQPTIDELVEMNLGTEDDPRPIFVSAMLTEEEREDYRSFLMEYRDCFTWTY 1806 Score = 27.7 bits (60), Expect(2) = 1e-12 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = -2 Query: 230 YMVTLQEEEEEIKMKNAPLELEDGG 156 + V E EEE+ AP +LEDGG Sbjct: 1732 FQVAAAEVEEELDTMQAPQQLEDGG 1756 >dbj|BAB08213.2| unnamed protein product [Oryza sativa Japonica Group] Length = 2876 Score = 69.3 bits (168), Expect(2) = 2e-10 Identities = 30/52 (57%), Positives = 41/52 (78%) Frame = -3 Query: 160 GGQATIDELVEINLGSDEDPRPTFLSTQLSKEEKASFKALLKEHIDYFAWTY 5 GGQ TIDELVE+NLG+++DPRP F+S L++EE+ +++ L E D FAWTY Sbjct: 1770 GGQPTIDELVEMNLGTEDDPRPIFVSGMLTEEEREDYRSFLMEFRDCFAWTY 1821 Score = 20.4 bits (41), Expect(2) = 2e-10 Identities = 8/17 (47%), Positives = 12/17 (70%) Frame = -2 Query: 206 EEEIKMKNAPLELEDGG 156 EEE+ + A +L+DGG Sbjct: 1755 EEELDVAGALKQLDDGG 1771 >gb|AAK92670.1|AC090714_3 putative gag-pol precursor [Oryza sativa Japonica Group] Length = 1262 Score = 68.2 bits (165), Expect = 7e-10 Identities = 31/50 (62%), Positives = 40/50 (80%) Frame = -3 Query: 154 QATIDELVEINLGSDEDPRPTFLSTQLSKEEKASFKALLKEHIDYFAWTY 5 Q TID+LVEINLG+ +DPRPTF+S LS EE+ S+++ L E+ D FAWTY Sbjct: 282 QPTIDDLVEINLGTMDDPRPTFVSAALSAEEQESYRSFLMEYRDCFAWTY 331 >gb|ABF97101.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1269 Score = 68.2 bits (165), Expect = 7e-10 Identities = 31/50 (62%), Positives = 40/50 (80%) Frame = -3 Query: 154 QATIDELVEINLGSDEDPRPTFLSTQLSKEEKASFKALLKEHIDYFAWTY 5 Q TID+LVEINLG+ +DPRPTF+S LS EE+ S+++ L E+ D FAWTY Sbjct: 282 QPTIDDLVEINLGTMDDPRPTFVSAALSAEEQESYRSFLMEYRDCFAWTY 331