BLASTX nr result

ID: Dioscorea21_contig00037717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037717
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAH67120.1| H0502G05.11 [Oryza sativa Indica Group]                70   1e-12
emb|CAD41628.3| OSJNBa0091D06.8 [Oryza sativa Japonica Group]          70   1e-12
dbj|BAB08213.2| unnamed protein product [Oryza sativa Japonica G...    69   2e-10
gb|AAK92670.1|AC090714_3 putative gag-pol precursor [Oryza sativ...    68   7e-10
gb|ABF97101.1| retrotransposon protein, putative, unclassified [...    68   7e-10

>emb|CAH67120.1| H0502G05.11 [Oryza sativa Indica Group]
          Length = 2933

 Score = 69.7 bits (169), Expect(2) = 1e-12
 Identities = 29/52 (55%), Positives = 41/52 (78%)
 Frame = -3

Query: 160  GGQATIDELVEINLGSDEDPRPTFLSTQLSKEEKASFKALLKEHIDYFAWTY 5
            GGQ TIDELVE+NLG+++DPRP F+S  L++EE+  +++ L E+ D F WTY
Sbjct: 1835 GGQPTIDELVEMNLGTEDDPRPIFVSAMLTEEEREDYRSFLMEYRDCFTWTY 1886



 Score = 27.7 bits (60), Expect(2) = 1e-12
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -2

Query: 230  YMVTLQEEEEEIKMKNAPLELEDGG 156
            + V   E EEE+    AP +LEDGG
Sbjct: 1812 FQVAAAEVEEELDTMQAPQQLEDGG 1836


>emb|CAD41628.3| OSJNBa0091D06.8 [Oryza sativa Japonica Group]
          Length = 2657

 Score = 69.7 bits (169), Expect(2) = 1e-12
 Identities = 29/52 (55%), Positives = 41/52 (78%)
 Frame = -3

Query: 160  GGQATIDELVEINLGSDEDPRPTFLSTQLSKEEKASFKALLKEHIDYFAWTY 5
            GGQ TIDELVE+NLG+++DPRP F+S  L++EE+  +++ L E+ D F WTY
Sbjct: 1755 GGQPTIDELVEMNLGTEDDPRPIFVSAMLTEEEREDYRSFLMEYRDCFTWTY 1806



 Score = 27.7 bits (60), Expect(2) = 1e-12
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -2

Query: 230  YMVTLQEEEEEIKMKNAPLELEDGG 156
            + V   E EEE+    AP +LEDGG
Sbjct: 1732 FQVAAAEVEEELDTMQAPQQLEDGG 1756


>dbj|BAB08213.2| unnamed protein product [Oryza sativa Japonica Group]
          Length = 2876

 Score = 69.3 bits (168), Expect(2) = 2e-10
 Identities = 30/52 (57%), Positives = 41/52 (78%)
 Frame = -3

Query: 160  GGQATIDELVEINLGSDEDPRPTFLSTQLSKEEKASFKALLKEHIDYFAWTY 5
            GGQ TIDELVE+NLG+++DPRP F+S  L++EE+  +++ L E  D FAWTY
Sbjct: 1770 GGQPTIDELVEMNLGTEDDPRPIFVSGMLTEEEREDYRSFLMEFRDCFAWTY 1821



 Score = 20.4 bits (41), Expect(2) = 2e-10
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 206  EEEIKMKNAPLELEDGG 156
            EEE+ +  A  +L+DGG
Sbjct: 1755 EEELDVAGALKQLDDGG 1771


>gb|AAK92670.1|AC090714_3 putative gag-pol precursor [Oryza sativa Japonica Group]
          Length = 1262

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/50 (62%), Positives = 40/50 (80%)
 Frame = -3

Query: 154 QATIDELVEINLGSDEDPRPTFLSTQLSKEEKASFKALLKEHIDYFAWTY 5
           Q TID+LVEINLG+ +DPRPTF+S  LS EE+ S+++ L E+ D FAWTY
Sbjct: 282 QPTIDDLVEINLGTMDDPRPTFVSAALSAEEQESYRSFLMEYRDCFAWTY 331


>gb|ABF97101.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1269

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/50 (62%), Positives = 40/50 (80%)
 Frame = -3

Query: 154 QATIDELVEINLGSDEDPRPTFLSTQLSKEEKASFKALLKEHIDYFAWTY 5
           Q TID+LVEINLG+ +DPRPTF+S  LS EE+ S+++ L E+ D FAWTY
Sbjct: 282 QPTIDDLVEINLGTMDDPRPTFVSAALSAEEQESYRSFLMEYRDCFAWTY 331


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