BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037709
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525492.1| pentatricopeptide repeat-containing protein,...   108   4e-22
emb|CBI17032.3| unnamed protein product [Vitis vinifera]              107   8e-22
ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containi...   106   2e-21
emb|CBI17034.3| unnamed protein product [Vitis vinifera]              106   2e-21
ref|XP_003610897.1| Pentatricopeptide repeat-containing protein ...   105   3e-21

>ref|XP_002525492.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535171|gb|EEF36850.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 542

 Score =  108 bits (270), Expect = 4e-22
 Identities = 56/105 (53%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
 Frame = -3

Query: 312 GLQHCRELHGLVTKFGFESEVEVGTALLKAYAGFGGDGDDCLRIF-EGIQEHDIVSWTGI 136
           GL +C +LH L  +  F  +VEV TAL+KAY+  GG+  DC ++F E     DIVSWTGI
Sbjct: 285 GLNYCFQLHCLSIRSAFVLQVEVATALVKAYSDLGGEVTDCYKLFLETGCYKDIVSWTGI 344

Query: 135 IVACAEQEPEKAILLFCRLQQQDLKPDRYTFSIVIRASAGFATER 1
           I A AE++PE+A+ LF +L ++DL PD YTFSIV++A AG  TER
Sbjct: 345 ITALAERQPEEALFLFRQLHREDLAPDWYTFSIVLKACAGLGTER 389



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
 Frame = -3

Query: 321 SCCGLQHCRELHGLVTKFGFESEVEVGTALLKAYAGFGGDGDDCLRIFEGIQEHDIVSWT 142
           S C   H +++H L  K G ++ V +G  L+  Y+  G   D+   +F  ++  ++VSW 
Sbjct: 174 SSCDYDHGKQVHALAFKMGLDATVYIGNTLISMYSNNGDSDDEAWSVFANLEYRNLVSWN 233

Query: 141 GIIVACAEQE-PEKAILLFCRLQQQDLKPDRYT-FSIVIRASAGFA 10
            +I     ++   KAI LF ++ +  +  DR T  S++   S G++
Sbjct: 234 SMIAGFQVRKLGAKAISLFSQMHRDGIGFDRATLLSVLSSLSEGYS 279


>emb|CBI17032.3| unnamed protein product [Vitis vinifera]
          Length = 694

 Score =  107 bits (268), Expect = 8e-22
 Identities = 56/111 (50%), Positives = 75/111 (67%), Gaps = 1/111 (0%)
 Frame = -3

Query: 333 CVISSCCGLQHCRELHGLVTKFGFESEVEVGTALLKAYAGFGGDGDDCLRIFEGIQ-EHD 157
           C+     GL+ C +L  L TK GF SE+EV T L+KAY+  GG+ +DC RIF  +    D
Sbjct: 264 CLCGMGDGLECCFQLQCLTTKTGFISEIEVPTGLVKAYSSLGGEVNDCYRIFLELDGRQD 323

Query: 156 IVSWTGIIVACAEQEPEKAILLFCRLQQQDLKPDRYTFSIVIRASAGFATE 4
           +VSWTGII   AE++PE+A LLF +  ++ L PDR+ FSIV++A AG ATE
Sbjct: 324 VVSWTGIIAVFAERDPEEAFLLFRQFLRECLAPDRHMFSIVLKACAGLATE 374


>ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71420-like [Vitis vinifera]
          Length = 741

 Score =  106 bits (265), Expect = 2e-21
 Identities = 56/118 (47%), Positives = 79/118 (66%), Gaps = 5/118 (4%)
 Frame = -3

Query: 339 MVCVISSCCG----LQHCRELHGLVTKFGFESEVEVGTALLKAYAGFGGDGDDCLRIFEG 172
           +V + S  CG    L+ C +L  L  K GF  ++EV TAL+KAY+  GG+  DC RIF  
Sbjct: 268 LVSIFSCLCGMGDGLECCFQLQCLTIKTGFILKIEVATALVKAYSSLGGEVSDCYRIFLE 327

Query: 171 IQ-EHDIVSWTGIIVACAEQEPEKAILLFCRLQQQDLKPDRYTFSIVIRASAGFATER 1
           +    D+VSWTGII A AE++P+KA+++F +  ++ L PDR+ FSIV++A AG ATER
Sbjct: 328 LDGRQDVVSWTGIIAAFAERDPKKALVIFRQFLRECLAPDRHMFSIVLKACAGLATER 385


>emb|CBI17034.3| unnamed protein product [Vitis vinifera]
          Length = 538

 Score =  106 bits (265), Expect = 2e-21
 Identities = 56/118 (47%), Positives = 79/118 (66%), Gaps = 5/118 (4%)
 Frame = -3

Query: 339 MVCVISSCCG----LQHCRELHGLVTKFGFESEVEVGTALLKAYAGFGGDGDDCLRIFEG 172
           +V + S  CG    L+ C +L  L  K GF  ++EV TAL+KAY+  GG+  DC RIF  
Sbjct: 112 LVSIFSCLCGMGDGLECCFQLQCLTIKTGFILKIEVATALVKAYSSLGGEVSDCYRIFLE 171

Query: 171 IQ-EHDIVSWTGIIVACAEQEPEKAILLFCRLQQQDLKPDRYTFSIVIRASAGFATER 1
           +    D+VSWTGII A AE++P+KA+++F +  ++ L PDR+ FSIV++A AG ATER
Sbjct: 172 LDGRQDVVSWTGIIAAFAERDPKKALVIFRQFLRECLAPDRHMFSIVLKACAGLATER 229


>ref|XP_003610897.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512232|gb|AES93855.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 774

 Score =  105 bits (263), Expect = 3e-21
 Identities = 54/104 (51%), Positives = 73/104 (70%), Gaps = 1/104 (0%)
 Frame = -3

Query: 309 LQHCRELHGLVTKFGFESEVEVGTALLKAYAGFGGDGDDCLRIF-EGIQEHDIVSWTGII 133
           L++C +LH L  K G  SEVEV TAL+K+YA  GG   DC ++F +   EHDIVSWT II
Sbjct: 315 LKNCFQLHCLTVKSGLISEVEVVTALVKSYADLGGHISDCFKLFLDTSGEHDIVSWTAII 374

Query: 132 VACAEQEPEKAILLFCRLQQQDLKPDRYTFSIVIRASAGFATER 1
              AE++PE+A LLFC+L +++   DR+TFSI ++A A F TE+
Sbjct: 375 SVFAERDPEQAFLLFCQLHRENFVLDRHTFSIALKACAYFVTEK 418