BLASTX nr result

ID: Dioscorea21_contig00037690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037690
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK28062.1| unknown [Arabidopsis thaliana]                          46   3e-09
ref|NP_001119440.1| Ribosomal protein L31 [Arabidopsis thaliana]...    46   3e-09
ref|XP_002529464.1| conserved hypothetical protein [Ricinus comm...    44   2e-07
ref|XP_002300177.1| predicted protein [Populus trichocarpa] gi|2...    41   2e-07
gb|AFK47375.1| unknown [Lotus japonicus]                               41   2e-07

>gb|ABK28062.1| unknown [Arabidopsis thaliana]
          Length = 77

 Score = 46.2 bits (108), Expect(2) = 3e-09
 Identities = 20/32 (62%), Positives = 25/32 (78%)
 Frame = -3

Query: 268 MIKGLHPQMQWM*KVTWSQGVMHVMMARVHNI 173
           M KGLHPQMQW+  VT S  +MHVMM R+H++
Sbjct: 1   MKKGLHPQMQWISYVTQSGRLMHVMMTRIHHV 32



 Score = 40.0 bits (92), Expect(2) = 3e-09
 Identities = 18/31 (58%), Positives = 22/31 (70%)
 Frame = -2

Query: 173 KVYHFGAKCQMAQRLAQIAKSRRFYKQNNGE 81
           KVYHFGAK QMAQ + QIAK +R + +   E
Sbjct: 34  KVYHFGAKRQMAQSIGQIAKFKRRFNEQEAE 64


>ref|NP_001119440.1| Ribosomal protein L31 [Arabidopsis thaliana]
           gi|186532215|ref|NP_001119441.1| Ribosomal protein L31
           [Arabidopsis thaliana] gi|297792983|ref|XP_002864376.1|
           hypothetical protein ARALYDRAFT_918652 [Arabidopsis
           lyrata subsp. lyrata] gi|98962143|gb|ABF59401.1| unknown
           protein [Arabidopsis thaliana]
           gi|297310211|gb|EFH40635.1| hypothetical protein
           ARALYDRAFT_918652 [Arabidopsis lyrata subsp. lyrata]
           gi|332009201|gb|AED96584.1| Ribosomal protein L31
           [Arabidopsis thaliana] gi|332009202|gb|AED96585.1|
           Ribosomal protein L31 [Arabidopsis thaliana]
          Length = 76

 Score = 46.2 bits (108), Expect(2) = 3e-09
 Identities = 20/32 (62%), Positives = 25/32 (78%)
 Frame = -3

Query: 268 MIKGLHPQMQWM*KVTWSQGVMHVMMARVHNI 173
           M KGLHPQMQW+  VT S  +MHVMM R+H++
Sbjct: 1   MKKGLHPQMQWISYVTQSGRLMHVMMTRIHHV 32



 Score = 40.0 bits (92), Expect(2) = 3e-09
 Identities = 18/31 (58%), Positives = 22/31 (70%)
 Frame = -2

Query: 173 KVYHFGAKCQMAQRLAQIAKSRRFYKQNNGE 81
           KVYHFGAK QMAQ + QIAK +R + +   E
Sbjct: 34  KVYHFGAKRQMAQSIGQIAKFKRRFNEQEAE 64


>ref|XP_002529464.1| conserved hypothetical protein [Ricinus communis]
           gi|223531080|gb|EEF32930.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 68

 Score = 43.9 bits (102), Expect(2) = 2e-07
 Identities = 17/32 (53%), Positives = 25/32 (78%)
 Frame = -3

Query: 268 MIKGLHPQMQWM*KVTWSQGVMHVMMARVHNI 173
           M KG+HPQMQW+  VT S  +MH+MM ++H++
Sbjct: 1   MKKGIHPQMQWISYVTQSGRLMHIMMTKIHHV 32



 Score = 36.2 bits (82), Expect(2) = 2e-07
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = -2

Query: 173 KVYHFGAKCQMAQRLAQIAKSRRFYKQNNGE 81
           KVYHF A+ Q+A+ L Q+AK +R Y Q + E
Sbjct: 34  KVYHFRARRQLAESLGQVAKFKRRYGQEDAE 64


>ref|XP_002300177.1| predicted protein [Populus trichocarpa] gi|222847435|gb|EEE84982.1|
           predicted protein [Populus trichocarpa]
          Length = 68

 Score = 41.2 bits (95), Expect(2) = 2e-07
 Identities = 16/32 (50%), Positives = 23/32 (71%)
 Frame = -3

Query: 268 MIKGLHPQMQWM*KVTWSQGVMHVMMARVHNI 173
           M KG+HPQMQW+  VT    +MH MM ++H++
Sbjct: 1   MKKGIHPQMQWISYVTQDGRLMHAMMTKIHHV 32



 Score = 38.9 bits (89), Expect(2) = 2e-07
 Identities = 19/30 (63%), Positives = 21/30 (70%)
 Frame = -2

Query: 170 VYHFGAKCQMAQRLAQIAKSRRFYKQNNGE 81
           VYHF AK QMA+ L QIAK +R Y Q N E
Sbjct: 35  VYHFRAKRQMAESLGQIAKFKRRYGQENAE 64


>gb|AFK47375.1| unknown [Lotus japonicus]
          Length = 68

 Score = 40.8 bits (94), Expect(2) = 2e-07
 Identities = 17/32 (53%), Positives = 24/32 (75%)
 Frame = -3

Query: 268 MIKGLHPQMQWM*KVTWSQGVMHVMMARVHNI 173
           M KG+HPQ QW+  VT +  +MHVMMA++H +
Sbjct: 1   MKKGVHPQKQWISYVTQTGRLMHVMMAKIHPV 32



 Score = 39.3 bits (90), Expect(2) = 2e-07
 Identities = 20/33 (60%), Positives = 22/33 (66%)
 Frame = -2

Query: 173 KVYHFGAKCQMAQRLAQIAKSRRFYKQNNGETD 75
           KVYHF AK QMA+ L QIAK RR +   N E D
Sbjct: 34  KVYHFRAKRQMAESLGQIAKFRRRFGLENPEAD 66


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