BLASTX nr result
ID: Dioscorea21_contig00037690
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00037690 (300 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK28062.1| unknown [Arabidopsis thaliana] 46 3e-09 ref|NP_001119440.1| Ribosomal protein L31 [Arabidopsis thaliana]... 46 3e-09 ref|XP_002529464.1| conserved hypothetical protein [Ricinus comm... 44 2e-07 ref|XP_002300177.1| predicted protein [Populus trichocarpa] gi|2... 41 2e-07 gb|AFK47375.1| unknown [Lotus japonicus] 41 2e-07 >gb|ABK28062.1| unknown [Arabidopsis thaliana] Length = 77 Score = 46.2 bits (108), Expect(2) = 3e-09 Identities = 20/32 (62%), Positives = 25/32 (78%) Frame = -3 Query: 268 MIKGLHPQMQWM*KVTWSQGVMHVMMARVHNI 173 M KGLHPQMQW+ VT S +MHVMM R+H++ Sbjct: 1 MKKGLHPQMQWISYVTQSGRLMHVMMTRIHHV 32 Score = 40.0 bits (92), Expect(2) = 3e-09 Identities = 18/31 (58%), Positives = 22/31 (70%) Frame = -2 Query: 173 KVYHFGAKCQMAQRLAQIAKSRRFYKQNNGE 81 KVYHFGAK QMAQ + QIAK +R + + E Sbjct: 34 KVYHFGAKRQMAQSIGQIAKFKRRFNEQEAE 64 >ref|NP_001119440.1| Ribosomal protein L31 [Arabidopsis thaliana] gi|186532215|ref|NP_001119441.1| Ribosomal protein L31 [Arabidopsis thaliana] gi|297792983|ref|XP_002864376.1| hypothetical protein ARALYDRAFT_918652 [Arabidopsis lyrata subsp. lyrata] gi|98962143|gb|ABF59401.1| unknown protein [Arabidopsis thaliana] gi|297310211|gb|EFH40635.1| hypothetical protein ARALYDRAFT_918652 [Arabidopsis lyrata subsp. lyrata] gi|332009201|gb|AED96584.1| Ribosomal protein L31 [Arabidopsis thaliana] gi|332009202|gb|AED96585.1| Ribosomal protein L31 [Arabidopsis thaliana] Length = 76 Score = 46.2 bits (108), Expect(2) = 3e-09 Identities = 20/32 (62%), Positives = 25/32 (78%) Frame = -3 Query: 268 MIKGLHPQMQWM*KVTWSQGVMHVMMARVHNI 173 M KGLHPQMQW+ VT S +MHVMM R+H++ Sbjct: 1 MKKGLHPQMQWISYVTQSGRLMHVMMTRIHHV 32 Score = 40.0 bits (92), Expect(2) = 3e-09 Identities = 18/31 (58%), Positives = 22/31 (70%) Frame = -2 Query: 173 KVYHFGAKCQMAQRLAQIAKSRRFYKQNNGE 81 KVYHFGAK QMAQ + QIAK +R + + E Sbjct: 34 KVYHFGAKRQMAQSIGQIAKFKRRFNEQEAE 64 >ref|XP_002529464.1| conserved hypothetical protein [Ricinus communis] gi|223531080|gb|EEF32930.1| conserved hypothetical protein [Ricinus communis] Length = 68 Score = 43.9 bits (102), Expect(2) = 2e-07 Identities = 17/32 (53%), Positives = 25/32 (78%) Frame = -3 Query: 268 MIKGLHPQMQWM*KVTWSQGVMHVMMARVHNI 173 M KG+HPQMQW+ VT S +MH+MM ++H++ Sbjct: 1 MKKGIHPQMQWISYVTQSGRLMHIMMTKIHHV 32 Score = 36.2 bits (82), Expect(2) = 2e-07 Identities = 16/31 (51%), Positives = 22/31 (70%) Frame = -2 Query: 173 KVYHFGAKCQMAQRLAQIAKSRRFYKQNNGE 81 KVYHF A+ Q+A+ L Q+AK +R Y Q + E Sbjct: 34 KVYHFRARRQLAESLGQVAKFKRRYGQEDAE 64 >ref|XP_002300177.1| predicted protein [Populus trichocarpa] gi|222847435|gb|EEE84982.1| predicted protein [Populus trichocarpa] Length = 68 Score = 41.2 bits (95), Expect(2) = 2e-07 Identities = 16/32 (50%), Positives = 23/32 (71%) Frame = -3 Query: 268 MIKGLHPQMQWM*KVTWSQGVMHVMMARVHNI 173 M KG+HPQMQW+ VT +MH MM ++H++ Sbjct: 1 MKKGIHPQMQWISYVTQDGRLMHAMMTKIHHV 32 Score = 38.9 bits (89), Expect(2) = 2e-07 Identities = 19/30 (63%), Positives = 21/30 (70%) Frame = -2 Query: 170 VYHFGAKCQMAQRLAQIAKSRRFYKQNNGE 81 VYHF AK QMA+ L QIAK +R Y Q N E Sbjct: 35 VYHFRAKRQMAESLGQIAKFKRRYGQENAE 64 >gb|AFK47375.1| unknown [Lotus japonicus] Length = 68 Score = 40.8 bits (94), Expect(2) = 2e-07 Identities = 17/32 (53%), Positives = 24/32 (75%) Frame = -3 Query: 268 MIKGLHPQMQWM*KVTWSQGVMHVMMARVHNI 173 M KG+HPQ QW+ VT + +MHVMMA++H + Sbjct: 1 MKKGVHPQKQWISYVTQTGRLMHVMMAKIHPV 32 Score = 39.3 bits (90), Expect(2) = 2e-07 Identities = 20/33 (60%), Positives = 22/33 (66%) Frame = -2 Query: 173 KVYHFGAKCQMAQRLAQIAKSRRFYKQNNGETD 75 KVYHF AK QMA+ L QIAK RR + N E D Sbjct: 34 KVYHFRAKRQMAESLGQIAKFRRRFGLENPEAD 66