BLASTX nr result

ID: Dioscorea21_contig00037635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037635
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containi...    96   3e-18
ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containi...    96   3e-18
ref|XP_003610936.1| Pentatricopeptide repeat-containing protein ...    94   9e-18
ref|XP_002459725.1| hypothetical protein SORBIDRAFT_02g009440 [S...    92   3e-17
emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]    91   1e-16

>ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Cucumis sativus]
           gi|449481506|ref|XP_004156203.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g71490-like [Cucumis sativus]
          Length = 712

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 40/78 (51%), Positives = 61/78 (78%)
 Frame = -1

Query: 236 ITMYSRCDDTVHAYVLFRMDTDRSLVCWNAMVAGFAHTDQVKEACLVFQELISCGMKPNY 57
           +TMY+RC D  HAY+LFR++ D+S + WN+M++G  H  +V+EA  +F+EL+  G++P+Y
Sbjct: 358 VTMYARCKDIRHAYMLFRLNDDKSRITWNSMLSGLTHLGRVEEALCLFRELLLFGVEPDY 417

Query: 56  VTMVTMLSLCARVADVQH 3
           VT  ++L LCARVAD+QH
Sbjct: 418 VTFASILPLCARVADLQH 435


>ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Glycine max]
          Length = 723

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 39/78 (50%), Positives = 60/78 (76%)
 Frame = -1

Query: 236 ITMYSRCDDTVHAYVLFRMDTDRSLVCWNAMVAGFAHTDQVKEACLVFQELISCGMKPNY 57
           ITMYSRC D  HA++LF    ++ L+ WNAM++G+AH D+ +E   +F+E++  GM+PNY
Sbjct: 359 ITMYSRCRDLGHAFILFHRTEEKGLITWNAMLSGYAHMDRYEEVTFLFREMLQEGMEPNY 418

Query: 56  VTMVTMLSLCARVADVQH 3
           VT+ ++L LCAR+A++QH
Sbjct: 419 VTIASVLPLCARIANLQH 436


>ref|XP_003610936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512271|gb|AES93894.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 812

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 40/78 (51%), Positives = 60/78 (76%)
 Frame = -1

Query: 236 ITMYSRCDDTVHAYVLFRMDTDRSLVCWNAMVAGFAHTDQVKEACLVFQELISCGMKPNY 57
           ITMYSRC D  HAY+LFR   ++ L+ WNAM++GFAH D+ +E   + +E++  G++PNY
Sbjct: 370 ITMYSRCRDLNHAYLLFRKIDEKGLITWNAMLSGFAHMDRSEEVSFLLREMLREGVEPNY 429

Query: 56  VTMVTMLSLCARVADVQH 3
           VT+ ++L LCAR+A++QH
Sbjct: 430 VTIASILPLCARIANLQH 447


>ref|XP_002459725.1| hypothetical protein SORBIDRAFT_02g009440 [Sorghum bicolor]
           gi|241923102|gb|EER96246.1| hypothetical protein
           SORBIDRAFT_02g009440 [Sorghum bicolor]
          Length = 691

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 42/78 (53%), Positives = 58/78 (74%)
 Frame = -1

Query: 236 ITMYSRCDDTVHAYVLFRMDTDRSLVCWNAMVAGFAHTDQVKEACLVFQELISCGMKPNY 57
           ITMY+RC+D  HA +LFRM     LV WN M+AGFA +D  + A  +F+E++   ++PNY
Sbjct: 337 ITMYARCNDMEHALMLFRMMRCPGLVAWNTMIAGFALSDDAEAASRIFREMVCSDVQPNY 396

Query: 56  VTMVTMLSLCARVADVQH 3
           VT+VT L+LCARVA++QH
Sbjct: 397 VTVVTYLALCARVANLQH 414


>emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
          Length = 822

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 38/78 (48%), Positives = 60/78 (76%)
 Frame = -1

Query: 236 ITMYSRCDDTVHAYVLFRMDTDRSLVCWNAMVAGFAHTDQVKEACLVFQELISCGMKPNY 57
           ITMYSRC D  HAY+LF++   +SL+ WN++++G  H D+ +EA  + +E++  G++PNY
Sbjct: 453 ITMYSRCKDLKHAYLLFQLMEAKSLISWNSIISGCCHMDRSEEASFLLREMLLSGIEPNY 512

Query: 56  VTMVTMLSLCARVADVQH 3
           VT+ ++L LCARVA++QH
Sbjct: 513 VTIASVLPLCARVANLQH 530


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