BLASTX nr result

ID: Dioscorea21_contig00037630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037630
         (205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudou...    63   2e-14
ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mi...    63   2e-14
gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucum...    63   2e-14
emb|CAN69118.1| hypothetical protein VITISV_031845 [Vitis vinifera]    60   3e-14
ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mi...    60   3e-14

>ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudouridine synthase A,
           mitochondrial-like [Cucumis sativus]
          Length = 519

 Score = 63.2 bits (152), Expect(2) = 2e-14
 Identities = 29/38 (76%), Positives = 31/38 (81%)
 Frame = +2

Query: 92  FTYDSPCFVDRFNSHLDPQIRIFGFKRATASFNAKKFC 205
           F  D P FVDR NS+L PQIRIFG+KR TASFNAKKFC
Sbjct: 128 FYIDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFC 165



 Score = 40.4 bits (93), Expect(2) = 2e-14
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = +3

Query: 3   RAQPRRYDWARAARTEKGVSVAGQV 77
           R   +RYDWAR+ART+KGVS  GQV
Sbjct: 99  RGLSKRYDWARSARTDKGVSAVGQV 123


>ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
           [Cucumis sativus]
          Length = 519

 Score = 63.2 bits (152), Expect(2) = 2e-14
 Identities = 29/38 (76%), Positives = 31/38 (81%)
 Frame = +2

Query: 92  FTYDSPCFVDRFNSHLDPQIRIFGFKRATASFNAKKFC 205
           F  D P FVDR NS+L PQIRIFG+KR TASFNAKKFC
Sbjct: 128 FYIDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFC 165



 Score = 40.4 bits (93), Expect(2) = 2e-14
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = +3

Query: 3   RAQPRRYDWARAARTEKGVSVAGQV 77
           R   +RYDWAR+ART+KGVS  GQV
Sbjct: 99  RGLSKRYDWARSARTDKGVSAVGQV 123


>gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucumis melo subsp.
           melo]
          Length = 519

 Score = 63.2 bits (152), Expect(2) = 2e-14
 Identities = 29/38 (76%), Positives = 31/38 (81%)
 Frame = +2

Query: 92  FTYDSPCFVDRFNSHLDPQIRIFGFKRATASFNAKKFC 205
           F  D P FVDR NS+L PQIRIFG+KR TASFNAKKFC
Sbjct: 128 FYIDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFC 165



 Score = 40.4 bits (93), Expect(2) = 2e-14
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = +3

Query: 3   RAQPRRYDWARAARTEKGVSVAGQV 77
           R   +RYDWAR+ART+KGVS  GQV
Sbjct: 99  RGLSKRYDWARSARTDKGVSAVGQV 123


>emb|CAN69118.1| hypothetical protein VITISV_031845 [Vitis vinifera]
          Length = 559

 Score = 60.1 bits (144), Expect(2) = 3e-14
 Identities = 28/38 (73%), Positives = 30/38 (78%)
 Frame = +2

Query: 92  FTYDSPCFVDRFNSHLDPQIRIFGFKRATASFNAKKFC 205
           F  D P  V+R NS+L PQIRIFGFKR TASFNAKKFC
Sbjct: 100 FYIDPPGLVERLNSNLPPQIRIFGFKRVTASFNAKKFC 137



 Score = 42.7 bits (99), Expect(2) = 3e-14
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = +3

Query: 3   RAQPRRYDWARAARTEKGVSVAGQV 77
           R  P+R+DWAR+ART+KGVS  GQV
Sbjct: 71  RGHPKRFDWARSARTDKGVSAVGQV 95


>ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Vitis
           vinifera]
          Length = 503

 Score = 60.1 bits (144), Expect(2) = 3e-14
 Identities = 28/38 (73%), Positives = 30/38 (78%)
 Frame = +2

Query: 92  FTYDSPCFVDRFNSHLDPQIRIFGFKRATASFNAKKFC 205
           F  D P  V+R NS+L PQIRIFGFKR TASFNAKKFC
Sbjct: 112 FYIDPPGLVERLNSNLPPQIRIFGFKRVTASFNAKKFC 149



 Score = 42.7 bits (99), Expect(2) = 3e-14
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = +3

Query: 3   RAQPRRYDWARAARTEKGVSVAGQV 77
           R  P+R+DWAR+ART+KGVS  GQV
Sbjct: 83  RGHPKRFDWARSARTDKGVSAVGQV 107


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