BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037626
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516541.1| PREDICTED: pentatricopeptide repeat-containi...   135   3e-30
emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]   135   3e-30
ref|XP_003612228.1| Pentatricopeptide repeat-containing protein ...   133   1e-29
ref|XP_003538888.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   132   4e-29
ref|NP_001054422.2| Os05g0107000 [Oryza sativa Japonica Group] g...   127   7e-28

>ref|XP_003516541.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g51320-like [Glycine max]
          Length = 579

 Score =  135 bits (340), Expect = 3e-30
 Identities = 65/118 (55%), Positives = 89/118 (75%)
 Frame = -2

Query: 354 FDRMPERNVVSWNIMISGCLKCRCPESGLDLFREMERVGVLANVKTMVSITTACGRLGLI 175
           FD+MPERN+V+WN+MISG LK R P   + LFREM R+G+  N +TMV + TACGR G +
Sbjct: 228 FDKMPERNLVTWNVMISGYLKGRNPGYAMKLFREMGRLGLRGNARTMVCVATACGRSGRL 287

Query: 174 RYGRSVHGYFVRSFREKNNLIFETALVDMYSKCKRVDVARKVFDRIAEKNLVSWNAMI 1
           +  +SVHG  VR    +++LI +TAL+ MY KC++V+VA+ VF+R+ E+NLVSWN MI
Sbjct: 288 KEAKSVHGSIVR-MSLRSSLILDTALIGMYCKCRKVEVAQIVFERMRERNLVSWNMMI 344



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 39/121 (32%), Positives = 54/121 (44%), Gaps = 13/121 (10%)
 Frame = -2

Query: 354 FDRMPERNVVSWNIMISGCLKCRCPESGLDLFREM-------------ERVGVLANVKTM 214
           F+RM ERN+VSWN+MI G      PE GLDLF  M             E + +L N  T 
Sbjct: 329 FERMRERNLVSWNMMILGHCIRGSPEDGLDLFEVMISMGKMKHGVESDETLRLLPNEVTF 388

Query: 213 VSITTACGRLGLIRYGRSVHGYFVRSFREKNNLIFETALVDMYSKCKRVDVARKVFDRIA 34
           + +  AC R  ++  GRS        F  K N      + ++ +  K V  A +    +A
Sbjct: 389 IGVLCACARAEMLDEGRSYFKQMTDVFGVKPNYAHFWCMANLLASVKLVGEAEEFLRSMA 448

Query: 33  E 31
           E
Sbjct: 449 E 449


>emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]
          Length = 901

 Score =  135 bits (340), Expect = 3e-30
 Identities = 68/118 (57%), Positives = 84/118 (71%)
 Frame = -2

Query: 354 FDRMPERNVVSWNIMISGCLKCRCPESGLDLFREMERVGVLANVKTMVSITTACGRLGLI 175
           FD MPERN VSWNIM+ G LK   P   L LFREM   G+     TMVS+ TAC R   +
Sbjct: 559 FDAMPERNAVSWNIMMGGYLKGGNPGCALKLFREMANAGLRGGETTMVSVLTACCRSARL 618

Query: 174 RYGRSVHGYFVRSFREKNNLIFETALVDMYSKCKRVDVARKVFDRIAEKNLVSWNAMI 1
           + GRS+HG  +R+F  K++LI +TAL+DMYSKC+RVDVAR V+DR+ + NLV WNAMI
Sbjct: 619 KEGRSIHGVLIRTFL-KSSLILDTALIDMYSKCERVDVARVVYDRMTKXNLVCWNAMI 675



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 33/118 (27%), Positives = 57/118 (48%)
 Frame = -2

Query: 354 FDRMPERNVVSWNIMISGCLKCRCPESGLDLFREMERVGVLANVKTMVSITTACGRLGLI 175
           F  +   + V  N +I            L  + E  R G + N  T   + + C + G +
Sbjct: 427 FRSIDSPDTVCVNAVIKAYSISSVAHQALVFYFETLRNGFMCNSFTFPPLFSCCRKXGCV 486

Query: 174 RYGRSVHGYFVRSFREKNNLIFETALVDMYSKCKRVDVARKVFDRIAEKNLVSWNAMI 1
            YG   HG  +++  + N L  + ++V MY  C  V+ A KVF  +++++LVSWN++I
Sbjct: 487 EYGEKFHGQAIKNGVD-NVLDVQNSMVHMYGCCGVVEXAEKVFGEMSKRDLVSWNSII 543


>ref|XP_003612228.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513563|gb|AES95186.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 665

 Score =  133 bits (335), Expect = 1e-29
 Identities = 66/118 (55%), Positives = 86/118 (72%)
 Frame = -2

Query: 354 FDRMPERNVVSWNIMISGCLKCRCPESGLDLFREMERVGVLANVKTMVSITTACGRLGLI 175
           FD MPERN+V+WN +ISG  K R P   L LFREM R+ +  N +TMV   TACGR G +
Sbjct: 226 FDVMPERNLVTWNCLISGYSKGRNPGYALKLFREMGRLRIRENARTMVCAVTACGRSGRL 285

Query: 174 RYGRSVHGYFVRSFREKNNLIFETALVDMYSKCKRVDVARKVFDRIAEKNLVSWNAMI 1
           + G+SVHG  +R F  +++LI +TAL+DMY KC RV+ A KVF+R++ +NLVSWNAMI
Sbjct: 286 KEGKSVHGSMIRLFM-RSSLILDTALIDMYCKCGRVEAASKVFERMSSRNLVSWNAMI 342



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
 Frame = -2

Query: 318 NIMISGCLKCRCPESGLDLFREMERVGVLANVKTMVSITTACGRLGLIRYGRSVHGYFVR 139
           N +I+       P   +  +    ++G  AN  T VS+ +AC ++  +  G+  HG  V 
Sbjct: 106 NTVINSYCNSYVPHKAIVFYFSSLKIGFFANSYTFVSLISACSKMSCVDNGKMCHGQAV- 164

Query: 138 SFREKNNLIF----ETALVDMYSKCKRVDVARKVFDRIAEKNLVSWNAMI 1
               KN + F    E +L  MY  C  V+VAR +FD +  ++LVSWN+MI
Sbjct: 165 ----KNGVDFVLPVENSLAHMYGSCGYVEVARVMFDGMVSRDLVSWNSMI 210


>ref|XP_003538888.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g51320-like [Glycine max]
          Length = 560

 Score =  132 bits (331), Expect = 4e-29
 Identities = 62/117 (52%), Positives = 89/117 (76%)
 Frame = -2

Query: 351 DRMPERNVVSWNIMISGCLKCRCPESGLDLFREMERVGVLANVKTMVSITTACGRLGLIR 172
           + MP+RN+V+WN+MISG LK R P   + LFREM R+G+  + +TMV + TACGR G ++
Sbjct: 246 NEMPDRNLVTWNVMISGYLKGRNPGYAMKLFREMGRLGLRGDARTMVCVATACGRSGRLK 305

Query: 171 YGRSVHGYFVRSFREKNNLIFETALVDMYSKCKRVDVARKVFDRIAEKNLVSWNAMI 1
            G+SV+G  VR    +++LI +T L+DMY KC++V+ AR+VF+R+ E+NLVSWNAMI
Sbjct: 306 EGKSVYGSIVRML-VRSSLILDTVLIDMYCKCRKVEDARRVFERMGERNLVSWNAMI 361



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 36/108 (33%), Positives = 48/108 (44%)
 Frame = -2

Query: 354 FDRMPERNVVSWNIMISGCLKCRCPESGLDLFREMERVGVLANVKTMVSITTACGRLGLI 175
           F+RM ERN+VSWN MI G      PE GL LF  M    V     T + +  AC R  ++
Sbjct: 346 FERMGERNLVSWNAMILGHCIRGSPEDGLGLFDVMIGSKVAPXXSTFIGVLCACARAEML 405

Query: 174 RYGRSVHGYFVRSFREKNNLIFETALVDMYSKCKRVDVARKVFDRIAE 31
             GRS       +F  K N      + ++ +    V  A +    IAE
Sbjct: 406 AEGRSFFKQMTDAFGVKPNYAHFWCMANLLANLGLVGEAEEFLRSIAE 453


>ref|NP_001054422.2| Os05g0107000 [Oryza sativa Japonica Group]
           gi|255675939|dbj|BAF16336.2| Os05g0107000 [Oryza sativa
           Japonica Group]
          Length = 359

 Score =  127 bits (320), Expect = 7e-28
 Identities = 64/118 (54%), Positives = 80/118 (67%)
 Frame = -2

Query: 354 FDRMPERNVVSWNIMISGCLKCRCPESGLDLFREMERVGVLANVKTMVSITTACGRLGLI 175
           FD M  RNVVSWNIMI+G +K + PE  L++ R M  +GV      MV   TAC RLG +
Sbjct: 218 FDGMLLRNVVSWNIMINGYVKVKRPEQALEVVRWMAEIGVRGTAVAMVGAATACARLGRL 277

Query: 174 RYGRSVHGYFVRSFREKNNLIFETALVDMYSKCKRVDVARKVFDRIAEKNLVSWNAMI 1
             G+ VH  F+R F E+ NL+F TALVDMY KC+  D ARKVFDR++ +N+V WNAMI
Sbjct: 278 GAGKEVHCAFLRRFEER-NLLFSTALVDMYGKCRNADAARKVFDRLSFRNVVCWNAMI 334