BLASTX nr result

ID: Dioscorea21_contig00037605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037605
         (222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635569.1| PREDICTED: pentatricopeptide repeat-containi...    86   2e-15
ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containi...    86   2e-15
ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containi...    86   2e-15
ref|XP_003610927.1| Pentatricopeptide repeat-containing protein ...    86   2e-15
emb|CBI25911.3| unnamed protein product [Vitis vinifera]               86   2e-15

>ref|XP_003635569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like, partial [Vitis vinifera]
          Length = 287

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 35/74 (47%), Positives = 53/74 (71%)
 Frame = -1

Query: 222 VWEPLLASCKVHGNVELAKRAAMKILQIKPDEPSVYVTLSSVHASDGIWDGKARVRDIMN 43
           +W  LL  C++HGN++LAKRAA  + +I+P+ P+ Y TL++++A+ G+W G A VR +M+
Sbjct: 86  LWASLLGGCRIHGNLKLAKRAAEALFEIEPENPATYTTLANIYATAGLWGGVAEVRKVMD 145

Query: 42  EHGVHKMPGRSWTE 1
             GV K PG SW E
Sbjct: 146 ARGVVKKPGLSWIE 159


>ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like, partial [Vitis vinifera]
          Length = 621

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 35/74 (47%), Positives = 53/74 (71%)
 Frame = -1

Query: 222 VWEPLLASCKVHGNVELAKRAAMKILQIKPDEPSVYVTLSSVHASDGIWDGKARVRDIMN 43
           +W  LL  C++HGN++LAKRAA  + +I+P+ P+ Y TL++++A+ G+W G A VR +M+
Sbjct: 494 LWASLLGGCRIHGNLKLAKRAAEALFEIEPENPATYTTLANIYATAGLWGGVAEVRKVMD 553

Query: 42  EHGVHKMPGRSWTE 1
             GV K PG SW E
Sbjct: 554 ARGVVKKPGLSWIE 567


>ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 777

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 38/74 (51%), Positives = 54/74 (72%)
 Frame = -1

Query: 222 VWEPLLASCKVHGNVELAKRAAMKILQIKPDEPSVYVTLSSVHASDGIWDGKARVRDIMN 43
           +W+ LLASCK HGNV++A+RAA  IL++ P   +  V LS++HAS G W   AR+R++M 
Sbjct: 656 MWKTLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASAGNWKEVARLRNLMK 715

Query: 42  EHGVHKMPGRSWTE 1
           + GV K+PG+SW E
Sbjct: 716 QMGVQKVPGQSWIE 729


>ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512262|gb|AES93885.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 802

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 32/74 (43%), Positives = 55/74 (74%)
 Frame = -1

Query: 222 VWEPLLASCKVHGNVELAKRAAMKILQIKPDEPSVYVTLSSVHASDGIWDGKARVRDIMN 43
           +W  LL  C++HGN+ELA+RAA  + +++P+ P+ Y+TLS+++A+ G+W  + +VR+ M+
Sbjct: 468 LWASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSNIYANAGLWTEETKVRNDMD 527

Query: 42  EHGVHKMPGRSWTE 1
             G+ K PG+SW E
Sbjct: 528 NRGIVKKPGKSWIE 541


>emb|CBI25911.3| unnamed protein product [Vitis vinifera]
          Length = 288

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 35/74 (47%), Positives = 53/74 (71%)
 Frame = -1

Query: 222 VWEPLLASCKVHGNVELAKRAAMKILQIKPDEPSVYVTLSSVHASDGIWDGKARVRDIMN 43
           +W  LL  C++HGN++LAKRAA  + +I+P+ P+ Y TL++++A+ G+W G A VR +M+
Sbjct: 87  LWASLLGGCRIHGNLKLAKRAAEALFEIEPENPATYTTLANIYATAGLWGGVAEVRKVMD 146

Query: 42  EHGVHKMPGRSWTE 1
             GV K PG SW E
Sbjct: 147 ARGVVKKPGLSWIE 160


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