BLASTX nr result

ID: Dioscorea21_contig00037599 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037599
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68758.1| hypothetical protein VITISV_004671 [Vitis vinifera]   101   5e-20
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   100   2e-19
gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]               99   5e-19
emb|CAN80930.1| hypothetical protein VITISV_005279 [Vitis vinifera]    98   6e-19
emb|CAN74767.1| hypothetical protein VITISV_041860 [Vitis vinifera]    98   6e-19

>emb|CAN68758.1| hypothetical protein VITISV_004671 [Vitis vinifera]
          Length = 972

 Score =  101 bits (252), Expect = 5e-20
 Identities = 52/90 (57%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
 Frame = +2

Query: 8   LSEIYNSCSFALIAA-YPITYDEASMDSNWLAAMNEEIESIRKNETWKLTELPEGRKAIG 184
           LSE     + AL+A+ YPI Y+EA M S W  AM+ EI SI KN+TWKLT+LP G K IG
Sbjct: 553 LSEGEIELNMALVASTYPINYEEAXMSSKWRLAMDSEINSIEKNQTWKLTDLPAGAKTIG 612

Query: 185 LKWVYK*KLNPDGTLLRKKARLVAKGFSQR 274
           +KW+YK KLN  G + + KARLVAKG+SQ+
Sbjct: 613 VKWIYKTKLNELGEVDKYKARLVAKGYSQQ 642


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  100 bits (248), Expect = 2e-19
 Identities = 45/86 (52%), Positives = 62/86 (72%)
 Frame = +2

Query: 17   IYNSCSFALIAAYPITYDEASMDSNWLAAMNEEIESIRKNETWKLTELPEGRKAIGLKWV 196
            +  SC FAL+ + PI Y+EA   S W  AM EEI++I +N TW+L + PEG+  IGLKWV
Sbjct: 806  VNTSCQFALLVSDPICYEEAVEQSEWKNAMIEEIQAIERNSTWELVDAPEGKNVIGLKWV 865

Query: 197  YK*KLNPDGTLLRKKARLVAKGFSQR 274
            ++ K N DG++ + KARLVAKG+SQ+
Sbjct: 866  FRTKYNADGSIQKHKARLVAKGYSQQ 891


>gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]
          Length = 2037

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 46/88 (52%), Positives = 63/88 (71%)
 Frame = +2

Query: 8    LSEIYNSCSFALIAAYPITYDEASMDSNWLAAMNEEIESIRKNETWKLTELPEGRKAIGL 187
            LS++Y  C+   + A P +Y EA+    W+ A+  EI+SI +N TWKLTELP+ +K IG+
Sbjct: 1261 LSDVYERCN--PVYAKPTSYTEAARFPAWIDAIKSEIDSIERNGTWKLTELPQNKKEIGV 1318

Query: 188  KWVYK*KLNPDGTLLRKKARLVAKGFSQ 271
            KWV+K K NPDG++ R KARLV KGF+Q
Sbjct: 1319 KWVFKTKFNPDGSIFRHKARLVVKGFAQ 1346


>emb|CAN80930.1| hypothetical protein VITISV_005279 [Vitis vinifera]
          Length = 1291

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 46/88 (52%), Positives = 62/88 (70%)
 Frame = +2

Query: 8    LSEIYNSCSFALIAAYPITYDEASMDSNWLAAMNEEIESIRKNETWKLTELPEGRKAIGL 187
            LS++Y  C+  L+ A P  Y EA+    W+ AM  EI++I +N TWKLTELPE + AIG+
Sbjct: 776  LSDVYERCN--LVHAEPTCYTEAARFLEWIEAMKAEIDAIERNGTWKLTELPEAKNAIGV 833

Query: 188  KWVYK*KLNPDGTLLRKKARLVAKGFSQ 271
            KWV++ K N DG++ R KARLV KGF+Q
Sbjct: 834  KWVFRTKFNSDGSIFRHKARLVVKGFAQ 861


>emb|CAN74767.1| hypothetical protein VITISV_041860 [Vitis vinifera]
          Length = 1945

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 46/88 (52%), Positives = 62/88 (70%)
 Frame = +2

Query: 8    LSEIYNSCSFALIAAYPITYDEASMDSNWLAAMNEEIESIRKNETWKLTELPEGRKAIGL 187
            LS++Y  C+  L+ A P  Y EA+    W+ AM  EI++I +N TWKLTELPE + AIG+
Sbjct: 869  LSDVYERCN--LVHAEPTCYTEAARFLEWIEAMKAEIDAIERNGTWKLTELPEAKNAIGV 926

Query: 188  KWVYK*KLNPDGTLLRKKARLVAKGFSQ 271
            KWV++ K N DG++ R KARLV KGF+Q
Sbjct: 927  KWVFRTKFNSDGSIFRHKARLVVKGFAQ 954


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