BLASTX nr result
ID: Dioscorea21_contig00037599
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00037599 (274 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN68758.1| hypothetical protein VITISV_004671 [Vitis vinifera] 101 5e-20 gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ... 100 2e-19 gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa] 99 5e-19 emb|CAN80930.1| hypothetical protein VITISV_005279 [Vitis vinifera] 98 6e-19 emb|CAN74767.1| hypothetical protein VITISV_041860 [Vitis vinifera] 98 6e-19 >emb|CAN68758.1| hypothetical protein VITISV_004671 [Vitis vinifera] Length = 972 Score = 101 bits (252), Expect = 5e-20 Identities = 52/90 (57%), Positives = 65/90 (72%), Gaps = 1/90 (1%) Frame = +2 Query: 8 LSEIYNSCSFALIAA-YPITYDEASMDSNWLAAMNEEIESIRKNETWKLTELPEGRKAIG 184 LSE + AL+A+ YPI Y+EA M S W AM+ EI SI KN+TWKLT+LP G K IG Sbjct: 553 LSEGEIELNMALVASTYPINYEEAXMSSKWRLAMDSEINSIEKNQTWKLTDLPAGAKTIG 612 Query: 185 LKWVYK*KLNPDGTLLRKKARLVAKGFSQR 274 +KW+YK KLN G + + KARLVAKG+SQ+ Sbjct: 613 VKWIYKTKLNELGEVDKYKARLVAKGYSQQ 642 >gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum] Length = 1333 Score = 100 bits (248), Expect = 2e-19 Identities = 45/86 (52%), Positives = 62/86 (72%) Frame = +2 Query: 17 IYNSCSFALIAAYPITYDEASMDSNWLAAMNEEIESIRKNETWKLTELPEGRKAIGLKWV 196 + SC FAL+ + PI Y+EA S W AM EEI++I +N TW+L + PEG+ IGLKWV Sbjct: 806 VNTSCQFALLVSDPICYEEAVEQSEWKNAMIEEIQAIERNSTWELVDAPEGKNVIGLKWV 865 Query: 197 YK*KLNPDGTLLRKKARLVAKGFSQR 274 ++ K N DG++ + KARLVAKG+SQ+ Sbjct: 866 FRTKYNADGSIQKHKARLVAKGYSQQ 891 >gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa] Length = 2037 Score = 98.6 bits (244), Expect = 5e-19 Identities = 46/88 (52%), Positives = 63/88 (71%) Frame = +2 Query: 8 LSEIYNSCSFALIAAYPITYDEASMDSNWLAAMNEEIESIRKNETWKLTELPEGRKAIGL 187 LS++Y C+ + A P +Y EA+ W+ A+ EI+SI +N TWKLTELP+ +K IG+ Sbjct: 1261 LSDVYERCN--PVYAKPTSYTEAARFPAWIDAIKSEIDSIERNGTWKLTELPQNKKEIGV 1318 Query: 188 KWVYK*KLNPDGTLLRKKARLVAKGFSQ 271 KWV+K K NPDG++ R KARLV KGF+Q Sbjct: 1319 KWVFKTKFNPDGSIFRHKARLVVKGFAQ 1346 >emb|CAN80930.1| hypothetical protein VITISV_005279 [Vitis vinifera] Length = 1291 Score = 98.2 bits (243), Expect = 6e-19 Identities = 46/88 (52%), Positives = 62/88 (70%) Frame = +2 Query: 8 LSEIYNSCSFALIAAYPITYDEASMDSNWLAAMNEEIESIRKNETWKLTELPEGRKAIGL 187 LS++Y C+ L+ A P Y EA+ W+ AM EI++I +N TWKLTELPE + AIG+ Sbjct: 776 LSDVYERCN--LVHAEPTCYTEAARFLEWIEAMKAEIDAIERNGTWKLTELPEAKNAIGV 833 Query: 188 KWVYK*KLNPDGTLLRKKARLVAKGFSQ 271 KWV++ K N DG++ R KARLV KGF+Q Sbjct: 834 KWVFRTKFNSDGSIFRHKARLVVKGFAQ 861 >emb|CAN74767.1| hypothetical protein VITISV_041860 [Vitis vinifera] Length = 1945 Score = 98.2 bits (243), Expect = 6e-19 Identities = 46/88 (52%), Positives = 62/88 (70%) Frame = +2 Query: 8 LSEIYNSCSFALIAAYPITYDEASMDSNWLAAMNEEIESIRKNETWKLTELPEGRKAIGL 187 LS++Y C+ L+ A P Y EA+ W+ AM EI++I +N TWKLTELPE + AIG+ Sbjct: 869 LSDVYERCN--LVHAEPTCYTEAARFLEWIEAMKAEIDAIERNGTWKLTELPEAKNAIGV 926 Query: 188 KWVYK*KLNPDGTLLRKKARLVAKGFSQ 271 KWV++ K N DG++ R KARLV KGF+Q Sbjct: 927 KWVFRTKFNSDGSIFRHKARLVVKGFAQ 954