BLASTX nr result
ID: Dioscorea21_contig00037581
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00037581 (388 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containi... 88 8e-16 ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containi... 79 4e-13 ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|2... 78 6e-13 emb|CBI31329.3| unnamed protein product [Vitis vinifera] 76 3e-12 ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containi... 76 3e-12 >ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71490-like [Glycine max] Length = 723 Score = 87.8 bits (216), Expect = 8e-16 Identities = 44/88 (50%), Positives = 58/88 (65%) Frame = -1 Query: 265 GLQLHARCITLGIAGNPFLVSRLTSFYSALGLLHDALLIVISSNTKRALSWNLLISAYCH 86 G QLHA+ I+LG+ NP LVSRL +FY+ + LL DA + SSNT L WNLLISAY Sbjct: 100 GKQLHAQVISLGLDQNPILVSRLVNFYTNVNLLVDAQFVTESSNTLDPLHWNLLISAYVR 159 Query: 85 HGLWREAIIAFAEMVGNDVEVDKYTYAS 2 +G + EA+ + M+ +E D+YTY S Sbjct: 160 NGFFVEALCVYKNMLNKKIEPDEYTYPS 187 >ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71490-like [Cucumis sativus] gi|449481506|ref|XP_004156203.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71490-like [Cucumis sativus] Length = 712 Score = 79.0 bits (193), Expect = 4e-13 Identities = 39/89 (43%), Positives = 56/89 (62%) Frame = -1 Query: 268 PGLQLHARCITLGIAGNPFLVSRLTSFYSALGLLHDALLIVISSNTKRALSWNLLISAYC 89 PG QLH I+ G+ + FLVS+L FYS+L L +A +V +SN R SWN+LI++Y Sbjct: 97 PGKQLHGHIISSGLVEDSFLVSKLVMFYSSLEFLPEAHTLVETSNLFRPCSWNILITSYV 156 Query: 88 HHGLWREAIIAFAEMVGNDVEVDKYTYAS 2 H L+ AI+A+ +MV V D +T+ S Sbjct: 157 KHKLYEAAILAYKQMVSKGVRPDNFTFPS 185 >ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|222862390|gb|EEE99896.1| predicted protein [Populus trichocarpa] Length = 683 Score = 78.2 bits (191), Expect = 6e-13 Identities = 41/88 (46%), Positives = 55/88 (62%) Frame = -1 Query: 265 GLQLHARCITLGIAGNPFLVSRLTSFYSALGLLHDALLIVISSNTKRALSWNLLISAYCH 86 G QLHA I+LG + LV +L +FYS+ LL DA I ++S+ L WNLLIS+Y + Sbjct: 60 GKQLHAHTISLGFENHLVLVPKLVTFYSSFSLLADAHTITVNSDIVNPLPWNLLISSYVN 119 Query: 85 HGLWREAIIAFAEMVGNDVEVDKYTYAS 2 +GL EA+ A+ EMV V D +TY S Sbjct: 120 NGLHGEALSAYREMVHKGVRPDNFTYPS 147 >emb|CBI31329.3| unnamed protein product [Vitis vinifera] Length = 753 Score = 75.9 bits (185), Expect = 3e-12 Identities = 38/88 (43%), Positives = 53/88 (60%) Frame = -1 Query: 265 GLQLHARCITLGIAGNPFLVSRLTSFYSALGLLHDALLIVISSNTKRALSWNLLISAYCH 86 G QLH I+LG +P LV +L +FYSA LL DA +I +SN WNLLIS+Y Sbjct: 119 GRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNILHPFPWNLLISSYVR 178 Query: 85 HGLWREAIIAFAEMVGNDVEVDKYTYAS 2 +G ++A+ A+ +MV + D +TY S Sbjct: 179 NGFCQKALSAYKQMVKKGIRPDNFTYPS 206 >ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71490-like [Vitis vinifera] Length = 748 Score = 75.9 bits (185), Expect = 3e-12 Identities = 38/88 (43%), Positives = 53/88 (60%) Frame = -1 Query: 265 GLQLHARCITLGIAGNPFLVSRLTSFYSALGLLHDALLIVISSNTKRALSWNLLISAYCH 86 G QLH I+LG +P LV +L +FYSA LL DA +I +SN WNLLIS+Y Sbjct: 119 GRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNILHPFPWNLLISSYVR 178 Query: 85 HGLWREAIIAFAEMVGNDVEVDKYTYAS 2 +G ++A+ A+ +MV + D +TY S Sbjct: 179 NGFCQKALSAYKQMVKKGIRPDNFTYPS 206