BLASTX nr result

ID: Dioscorea21_contig00037581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037581
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containi...    88   8e-16
ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containi...    79   4e-13
ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|2...    78   6e-13
emb|CBI31329.3| unnamed protein product [Vitis vinifera]               76   3e-12
ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containi...    76   3e-12

>ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Glycine max]
          Length = 723

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 44/88 (50%), Positives = 58/88 (65%)
 Frame = -1

Query: 265 GLQLHARCITLGIAGNPFLVSRLTSFYSALGLLHDALLIVISSNTKRALSWNLLISAYCH 86
           G QLHA+ I+LG+  NP LVSRL +FY+ + LL DA  +  SSNT   L WNLLISAY  
Sbjct: 100 GKQLHAQVISLGLDQNPILVSRLVNFYTNVNLLVDAQFVTESSNTLDPLHWNLLISAYVR 159

Query: 85  HGLWREAIIAFAEMVGNDVEVDKYTYAS 2
           +G + EA+  +  M+   +E D+YTY S
Sbjct: 160 NGFFVEALCVYKNMLNKKIEPDEYTYPS 187


>ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Cucumis sativus]
           gi|449481506|ref|XP_004156203.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g71490-like [Cucumis sativus]
          Length = 712

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/89 (43%), Positives = 56/89 (62%)
 Frame = -1

Query: 268 PGLQLHARCITLGIAGNPFLVSRLTSFYSALGLLHDALLIVISSNTKRALSWNLLISAYC 89
           PG QLH   I+ G+  + FLVS+L  FYS+L  L +A  +V +SN  R  SWN+LI++Y 
Sbjct: 97  PGKQLHGHIISSGLVEDSFLVSKLVMFYSSLEFLPEAHTLVETSNLFRPCSWNILITSYV 156

Query: 88  HHGLWREAIIAFAEMVGNDVEVDKYTYAS 2
            H L+  AI+A+ +MV   V  D +T+ S
Sbjct: 157 KHKLYEAAILAYKQMVSKGVRPDNFTFPS 185


>ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|222862390|gb|EEE99896.1|
           predicted protein [Populus trichocarpa]
          Length = 683

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 41/88 (46%), Positives = 55/88 (62%)
 Frame = -1

Query: 265 GLQLHARCITLGIAGNPFLVSRLTSFYSALGLLHDALLIVISSNTKRALSWNLLISAYCH 86
           G QLHA  I+LG   +  LV +L +FYS+  LL DA  I ++S+    L WNLLIS+Y +
Sbjct: 60  GKQLHAHTISLGFENHLVLVPKLVTFYSSFSLLADAHTITVNSDIVNPLPWNLLISSYVN 119

Query: 85  HGLWREAIIAFAEMVGNDVEVDKYTYAS 2
           +GL  EA+ A+ EMV   V  D +TY S
Sbjct: 120 NGLHGEALSAYREMVHKGVRPDNFTYPS 147


>emb|CBI31329.3| unnamed protein product [Vitis vinifera]
          Length = 753

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/88 (43%), Positives = 53/88 (60%)
 Frame = -1

Query: 265 GLQLHARCITLGIAGNPFLVSRLTSFYSALGLLHDALLIVISSNTKRALSWNLLISAYCH 86
           G QLH   I+LG   +P LV +L +FYSA  LL DA +I  +SN      WNLLIS+Y  
Sbjct: 119 GRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNILHPFPWNLLISSYVR 178

Query: 85  HGLWREAIIAFAEMVGNDVEVDKYTYAS 2
           +G  ++A+ A+ +MV   +  D +TY S
Sbjct: 179 NGFCQKALSAYKQMVKKGIRPDNFTYPS 206


>ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Vitis vinifera]
          Length = 748

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/88 (43%), Positives = 53/88 (60%)
 Frame = -1

Query: 265 GLQLHARCITLGIAGNPFLVSRLTSFYSALGLLHDALLIVISSNTKRALSWNLLISAYCH 86
           G QLH   I+LG   +P LV +L +FYSA  LL DA +I  +SN      WNLLIS+Y  
Sbjct: 119 GRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNILHPFPWNLLISSYVR 178

Query: 85  HGLWREAIIAFAEMVGNDVEVDKYTYAS 2
           +G  ++A+ A+ +MV   +  D +TY S
Sbjct: 179 NGFCQKALSAYKQMVKKGIRPDNFTYPS 206


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