BLASTX nr result

ID: Dioscorea21_contig00037556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037556
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001066803.1| Os12g0493900 [Oryza sativa Japonica Group] g...   121   7e-26
gb|EAY83181.1| hypothetical protein OsI_38391 [Oryza sativa Indi...   121   7e-26
ref|XP_003576172.1| PREDICTED: putative pumilio homolog 7, chlor...   119   4e-25
ref|XP_002442160.1| hypothetical protein SORBIDRAFT_08g015290 [S...   118   6e-25
dbj|BAJ98379.1| predicted protein [Hordeum vulgare subsp. vulgare]    115   7e-24

>ref|NP_001066803.1| Os12g0493900 [Oryza sativa Japonica Group]
           gi|77555831|gb|ABA98627.1| Pumilio-family RNA binding
           repeat containing protein, expressed [Oryza sativa
           Japonica Group] gi|113649310|dbj|BAF29822.1|
           Os12g0493900 [Oryza sativa Japonica Group]
           gi|125579396|gb|EAZ20542.1| hypothetical protein
           OsJ_36154 [Oryza sativa Japonica Group]
          Length = 520

 Score =  121 bits (304), Expect = 7e-26
 Identities = 60/84 (71%), Positives = 70/84 (83%)
 Frame = +3

Query: 3   NVVEKCLKVVSEDHRAKIILELISVPRFELLMQDPFANYVIQSALQSSKGSLHAALVDAI 182
           NVVEKCLKV  E  +A IILEL++VP FE L+Q PFANYVI SA+Q+SKGSLH+AL +AI
Sbjct: 437 NVVEKCLKVFKEADKATIILELLAVPHFEQLLQHPFANYVIYSAIQNSKGSLHSALTNAI 496

Query: 183 RPHASHLRTSPFCKRIFSRAQLKK 254
           RPH   LRTSP+CKRI+SRA LKK
Sbjct: 497 RPHVELLRTSPYCKRIYSRALLKK 520


>gb|EAY83181.1| hypothetical protein OsI_38391 [Oryza sativa Indica Group]
          Length = 503

 Score =  121 bits (304), Expect = 7e-26
 Identities = 60/84 (71%), Positives = 70/84 (83%)
 Frame = +3

Query: 3   NVVEKCLKVVSEDHRAKIILELISVPRFELLMQDPFANYVIQSALQSSKGSLHAALVDAI 182
           NVVEKCLKV  E  +A IILEL++VP FE L+Q PFANYVI SA+Q+SKGSLH+AL +AI
Sbjct: 420 NVVEKCLKVFKEADKATIILELLAVPHFEQLLQHPFANYVIYSAIQNSKGSLHSALTNAI 479

Query: 183 RPHASHLRTSPFCKRIFSRAQLKK 254
           RPH   LRTSP+CKRI+SRA LKK
Sbjct: 480 RPHVELLRTSPYCKRIYSRALLKK 503


>ref|XP_003576172.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like
           [Brachypodium distachyon]
          Length = 506

 Score =  119 bits (298), Expect = 4e-25
 Identities = 58/84 (69%), Positives = 69/84 (82%)
 Frame = +3

Query: 3   NVVEKCLKVVSEDHRAKIILELISVPRFELLMQDPFANYVIQSALQSSKGSLHAALVDAI 182
           NVVEKCLKV  E  +A IILEL++ P FE L+Q P+ANYV+ SALQ+SKGSLH+AL +AI
Sbjct: 423 NVVEKCLKVFKEADKATIILELLAAPHFERLLQHPYANYVVYSALQNSKGSLHSALTNAI 482

Query: 183 RPHASHLRTSPFCKRIFSRAQLKK 254
           RPH   LRTSP+CKRI+SRA LKK
Sbjct: 483 RPHVELLRTSPYCKRIYSRALLKK 506


>ref|XP_002442160.1| hypothetical protein SORBIDRAFT_08g015290 [Sorghum bicolor]
           gi|241942853|gb|EES15998.1| hypothetical protein
           SORBIDRAFT_08g015290 [Sorghum bicolor]
          Length = 562

 Score =  118 bits (296), Expect = 6e-25
 Identities = 58/84 (69%), Positives = 69/84 (82%)
 Frame = +3

Query: 3   NVVEKCLKVVSEDHRAKIILELISVPRFELLMQDPFANYVIQSALQSSKGSLHAALVDAI 182
           NVVEKCLKV  E  +AKIILE+++ P  E L+Q P+ANYVI SALQ+SKGSLH+AL +AI
Sbjct: 479 NVVEKCLKVFKEVDKAKIILEILATPHLEQLLQHPYANYVIYSALQNSKGSLHSALTNAI 538

Query: 183 RPHASHLRTSPFCKRIFSRAQLKK 254
           RPH   LRTSP+CKRI+SRA LKK
Sbjct: 539 RPHVELLRTSPYCKRIYSRALLKK 562


>dbj|BAJ98379.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 484

 Score =  115 bits (287), Expect = 7e-24
 Identities = 55/84 (65%), Positives = 69/84 (82%)
 Frame = +3

Query: 3   NVVEKCLKVVSEDHRAKIILELISVPRFELLMQDPFANYVIQSALQSSKGSLHAALVDAI 182
           NVVEKCLKV  E  +A IIL+L++ P+FE L+  P+ANYV+ +ALQ+SKGSLH+AL +AI
Sbjct: 401 NVVEKCLKVFKEADKANIILQLLAAPQFERLLLHPYANYVVYAALQNSKGSLHSALTNAI 460

Query: 183 RPHASHLRTSPFCKRIFSRAQLKK 254
           RPH   LRTSP+CKRI+SRA LKK
Sbjct: 461 RPHVELLRTSPYCKRIYSRALLKK 484


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