BLASTX nr result

ID: Dioscorea21_contig00037531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037531
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315444.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002524982.1| RNA binding protein, putative [Ricinus commu...    67   2e-09
ref|XP_003591770.1| RNA-binding protein [Medicago truncatula] gi...    67   2e-09
ref|XP_004169984.1| PREDICTED: uncharacterized LOC101208465 [Cuc...    65   4e-09
ref|XP_004140988.1| PREDICTED: uncharacterized protein LOC101208...    65   4e-09

>ref|XP_002315444.1| predicted protein [Populus trichocarpa] gi|222864484|gb|EEF01615.1|
           predicted protein [Populus trichocarpa]
          Length = 311

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/56 (60%), Positives = 38/56 (67%)
 Frame = +1

Query: 1   KISKRSKGYAFIXXXXXXXXXXXLKEMNGKIINGWMIVVDVARTNQARQGSPRARR 168
           KISKRSKGYAF+           LKEMNGKIINGWMIVVDVA++N  R    R R+
Sbjct: 254 KISKRSKGYAFVKYTTEEAASSALKEMNGKIINGWMIVVDVAKSNPPRYSRGRPRQ 309


>ref|XP_002524982.1| RNA binding protein, putative [Ricinus communis]
           gi|223535726|gb|EEF37389.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 371

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/55 (63%), Positives = 37/55 (67%)
 Frame = +1

Query: 1   KISKRSKGYAFIXXXXXXXXXXXLKEMNGKIINGWMIVVDVARTNQARQGSPRAR 165
           KISKRSKGYAFI           LKEMNGKIINGWMIVVDVA+T+  R    R R
Sbjct: 314 KISKRSKGYAFIEYTTEEAANAALKEMNGKIINGWMIVVDVAKTSPPRYSRGRRR 368


>ref|XP_003591770.1| RNA-binding protein [Medicago truncatula]
           gi|355480818|gb|AES62021.1| RNA-binding protein
           [Medicago truncatula]
          Length = 284

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/55 (63%), Positives = 36/55 (65%)
 Frame = +1

Query: 1   KISKRSKGYAFIXXXXXXXXXXXLKEMNGKIINGWMIVVDVARTNQARQGSPRAR 165
           KISKRSKGYAFI           LKEMNGKIINGWMIVVDVA+T   R     AR
Sbjct: 227 KISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPPRYNKGHAR 281


>ref|XP_004169984.1| PREDICTED: uncharacterized LOC101208465 [Cucumis sativus]
          Length = 394

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 32/54 (59%), Positives = 37/54 (68%)
 Frame = +1

Query: 1   KISKRSKGYAFIXXXXXXXXXXXLKEMNGKIINGWMIVVDVARTNQARQGSPRA 162
           KISKRSKGYAF+           LKEMNGKIINGWMIVVD+A+ +  R G  R+
Sbjct: 341 KISKRSKGYAFVEYTTEEAASAALKEMNGKIINGWMIVVDIAKPSPRRYGGNRS 394


>ref|XP_004140988.1| PREDICTED: uncharacterized protein LOC101208465 [Cucumis sativus]
          Length = 394

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 32/54 (59%), Positives = 37/54 (68%)
 Frame = +1

Query: 1   KISKRSKGYAFIXXXXXXXXXXXLKEMNGKIINGWMIVVDVARTNQARQGSPRA 162
           KISKRSKGYAF+           LKEMNGKIINGWMIVVD+A+ +  R G  R+
Sbjct: 341 KISKRSKGYAFVEYTTEEAASAALKEMNGKIINGWMIVVDIAKPSPRRYGGNRS 394


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