BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037480
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [...   138   4e-31
ref|NP_194284.2| DNA mismatch repair protein Msh3 [Arabidopsis t...   138   5e-31
emb|CAB81364.1| putative DNA mismatch repair protein [Arabidopsi...   138   5e-31
emb|CAA18172.1| putative DNA mismatch repair protein [Arabidopsi...   138   5e-31
ref|XP_002322465.1| predicted protein [Populus trichocarpa] gi|2...   137   9e-31

>ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [Ricinus communis]
           gi|223549918|gb|EEF51405.1| DNA mismatch repair protein
           MSH3, putative [Ricinus communis]
          Length = 1100

 Score =  138 bits (348), Expect = 4e-31
 Identities = 74/128 (57%), Positives = 89/128 (69%)
 Frame = -2

Query: 391 IEMTLSANALHQLEVLKNNSDGSAEGSLLQVMNHTCTPFGSRLLKHWVSHPLRDRNLISA 212
           +EM LSAN L QLEVL+NNS+GS  GSL  +MNHT T  GSRLL+HWV+HPL DRN+ISA
Sbjct: 416 VEMNLSANTLQQLEVLRNNSNGSDSGSLFNIMNHTLTISGSRLLRHWVTHPLCDRNMISA 475

Query: 211 RLDAVAEIAKSIDSHKASEVVFDLDGENLCKXXXXXXXXXXXXXXLTMLAKCSDIQRGLT 32
           RLDAV+EIA+S+ S+KA +   D D E+                 L ML +  DIQRG+T
Sbjct: 476 RLDAVSEIAESMGSYKALQNTGDFDEEDSDVAIIQPDFYHLLSTVLEMLGRSPDIQRGIT 535

Query: 31  RIFHRTAT 8
           RIFHRTAT
Sbjct: 536 RIFHRTAT 543


>ref|NP_194284.2| DNA mismatch repair protein Msh3 [Arabidopsis thaliana]
           gi|12644077|sp|O65607.2|MSH3_ARATH RecName: Full=DNA
           mismatch repair protein MSH3; Short=AtMSH3; AltName:
           Full=MutS protein homolog 3 gi|3319876|emb|CAA07684.1|
           Msh3 protein [Arabidopsis thaliana]
           gi|332659675|gb|AEE85075.1| DNA mismatch repair protein
           Msh3 [Arabidopsis thaliana]
          Length = 1081

 Score =  138 bits (347), Expect = 5e-31
 Identities = 73/126 (57%), Positives = 89/126 (70%)
 Frame = -2

Query: 388 EMTLSANALHQLEVLKNNSDGSAEGSLLQVMNHTCTPFGSRLLKHWVSHPLRDRNLISAR 209
           EMTLSAN L QLEV+KNNSDGS  GSL   MNHT T +GSRLL+HWV+HPL DRNLISAR
Sbjct: 419 EMTLSANTLQQLEVVKNNSDGSESGSLFHNMNHTLTVYGSRLLRHWVTHPLCDRNLISAR 478

Query: 208 LDAVAEIAKSIDSHKASEVVFDLDGENLCKXXXXXXXXXXXXXXLTMLAKCSDIQRGLTR 29
           LDAV+EI+  + SH +S++  +L  E   +              LT +++ SDIQRG+TR
Sbjct: 479 LDAVSEISACMGSHSSSQLSSELVEEGSERAIVSPEFYLVLSSVLTAMSRSSDIQRGITR 538

Query: 28  IFHRTA 11
           IFHRTA
Sbjct: 539 IFHRTA 544


>emb|CAB81364.1| putative DNA mismatch repair protein [Arabidopsis thaliana]
          Length = 1076

 Score =  138 bits (347), Expect = 5e-31
 Identities = 73/126 (57%), Positives = 89/126 (70%)
 Frame = -2

Query: 388 EMTLSANALHQLEVLKNNSDGSAEGSLLQVMNHTCTPFGSRLLKHWVSHPLRDRNLISAR 209
           EMTLSAN L QLEV+KNNSDGS  GSL   MNHT T +GSRLL+HWV+HPL DRNLISAR
Sbjct: 402 EMTLSANTLQQLEVVKNNSDGSESGSLFHNMNHTLTVYGSRLLRHWVTHPLCDRNLISAR 461

Query: 208 LDAVAEIAKSIDSHKASEVVFDLDGENLCKXXXXXXXXXXXXXXLTMLAKCSDIQRGLTR 29
           LDAV+EI+  + SH +S++  +L  E   +              LT +++ SDIQRG+TR
Sbjct: 462 LDAVSEISACMGSHSSSQLSSELVEEGSERAIVSPEFYLVLSSVLTAMSRSSDIQRGITR 521

Query: 28  IFHRTA 11
           IFHRTA
Sbjct: 522 IFHRTA 527


>emb|CAA18172.1| putative DNA mismatch repair protein [Arabidopsis thaliana]
          Length = 1076

 Score =  138 bits (347), Expect = 5e-31
 Identities = 73/126 (57%), Positives = 89/126 (70%)
 Frame = -2

Query: 388 EMTLSANALHQLEVLKNNSDGSAEGSLLQVMNHTCTPFGSRLLKHWVSHPLRDRNLISAR 209
           EMTLSAN L QLEV+KNNSDGS  GSL   MNHT T +GSRLL+HWV+HPL DRNLISAR
Sbjct: 402 EMTLSANTLQQLEVVKNNSDGSESGSLFHNMNHTLTVYGSRLLRHWVTHPLCDRNLISAR 461

Query: 208 LDAVAEIAKSIDSHKASEVVFDLDGENLCKXXXXXXXXXXXXXXLTMLAKCSDIQRGLTR 29
           LDAV+EI+  + SH +S++  +L  E   +              LT +++ SDIQRG+TR
Sbjct: 462 LDAVSEISACMGSHSSSQLSSELVEEGSERAIVSPEFYLVLSSVLTAMSRSSDIQRGITR 521

Query: 28  IFHRTA 11
           IFHRTA
Sbjct: 522 IFHRTA 527


>ref|XP_002322465.1| predicted protein [Populus trichocarpa] gi|222869461|gb|EEF06592.1|
           predicted protein [Populus trichocarpa]
          Length = 1092

 Score =  137 bits (345), Expect = 9e-31
 Identities = 73/128 (57%), Positives = 90/128 (70%)
 Frame = -2

Query: 391 IEMTLSANALHQLEVLKNNSDGSAEGSLLQVMNHTCTPFGSRLLKHWVSHPLRDRNLISA 212
           +EM LSAN L QLEVL+NNSDGS  GSLL +MNHT T +GSRLL+HWV+HPL DRN+ISA
Sbjct: 400 MEMNLSANTLQQLEVLRNNSDGSESGSLLHIMNHTLTIYGSRLLRHWVTHPLCDRNMISA 459

Query: 211 RLDAVAEIAKSIDSHKASEVVFDLDGENLCKXXXXXXXXXXXXXXLTMLAKCSDIQRGLT 32
           RLDAV+EIA+ +   K S+ V +LD ++                 LT L +  DI+RG+T
Sbjct: 460 RLDAVSEIAECMGFSKDSQRVSELDEDDSEVAIVQPDLYYLLSAVLTALGRSPDIERGIT 519

Query: 31  RIFHRTAT 8
           RIFHRTAT
Sbjct: 520 RIFHRTAT 527