BLASTX nr result

ID: Dioscorea21_contig00037458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037458
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD40973.2| OSJNBa0027P08.5 [Oryza sativa Japonica Group]          67   2e-09
gb|EAY94275.1| hypothetical protein OsI_16044 [Oryza sativa Indi...    67   2e-09
ref|NP_001052895.2| Os04g0444700 [Oryza sativa Japonica Group] g...    65   8e-09
ref|XP_002519380.1| ATRAD3, putative [Ricinus communis] gi|22354...    64   1e-08
ref|XP_002328742.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07

>emb|CAD40973.2| OSJNBa0027P08.5 [Oryza sativa Japonica Group]
          Length = 469

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/102 (32%), Positives = 65/102 (63%), Gaps = 2/102 (1%)
 Frame = +2

Query: 17  NRTKQVEMGGMDDYHRKPSQQQSSSIRNKLKIVLLVLSTNILTFYLVAGPSANFKL--SK 190
           ++ +Q++   MD  HR P+ +  +  R+K+K++LLV++TN+++ YL +G S + +L    
Sbjct: 12  SQQQQLDAAIMDGAHRSPAARPPAPPRSKMKLLLLVIATNLVSVYLFSGASLSLRLPAGA 71

Query: 191 YAPKLQFFDSETLLHELNSTQAKLSSSQTEMVELRRRLMTSN 316
            AP +  +DS  LL +L +T+A L++++ E+  LR +   S+
Sbjct: 72  AAPSIHLWDSSALLRDLGATRAALAAARAEVAALRAQCNASS 113


>gb|EAY94275.1| hypothetical protein OsI_16044 [Oryza sativa Indica Group]
          Length = 378

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/102 (32%), Positives = 65/102 (63%), Gaps = 2/102 (1%)
 Frame = +2

Query: 17  NRTKQVEMGGMDDYHRKPSQQQSSSIRNKLKIVLLVLSTNILTFYLVAGPSANFKL--SK 190
           ++ +Q++   MD  HR P+ +  +  R+K+K++LLV++TN+++ YL +G S + +L    
Sbjct: 12  SQQQQLDAAIMDGAHRSPAARPPAPPRSKMKLLLLVIATNLVSVYLFSGASLSLRLPAGA 71

Query: 191 YAPKLQFFDSETLLHELNSTQAKLSSSQTEMVELRRRLMTSN 316
            AP +  +DS  LL +L +T+A L++++ E+  LR +   S+
Sbjct: 72  AAPSIHLWDSSALLRDLGATRAALAAARAEVAALRAQCNASS 113


>ref|NP_001052895.2| Os04g0444700 [Oryza sativa Japonica Group]
           gi|255675504|dbj|BAF14809.2| Os04g0444700 [Oryza sativa
           Japonica Group]
          Length = 448

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 32/92 (34%), Positives = 59/92 (64%), Gaps = 2/92 (2%)
 Frame = +2

Query: 47  MDDYHRKPSQQQSSSIRNKLKIVLLVLSTNILTFYLVAGPSANFKL--SKYAPKLQFFDS 220
           MD  HR P+ +  +  R+K+K++LLV++TN+++ YL +G S + +L     AP +  +DS
Sbjct: 1   MDGAHRSPAARPPAPPRSKMKLLLLVIATNLVSVYLFSGASLSLRLPAGAAAPSIHLWDS 60

Query: 221 ETLLHELNSTQAKLSSSQTEMVELRRRLMTSN 316
             LL +L +T+A L++++ E+  LR +   S+
Sbjct: 61  SALLRDLGATRAALAAARAEVAALRAQCNASS 92


>ref|XP_002519380.1| ATRAD3, putative [Ricinus communis] gi|223541447|gb|EEF42997.1|
           ATRAD3, putative [Ricinus communis]
          Length = 449

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 39/96 (40%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
 Frame = +2

Query: 41  GGMDDYHRKPSQQQSSSIRNKLKIVLLVLSTNILTFYLVAGPSANFKL----SKYAPKLQ 208
           G   DY +K S QQ  + + KLK+++LV+ TN+LT Y+ AGPS N KL    + + P   
Sbjct: 4   GADQDYLKKHSHQQLHT-KYKLKMLVLVILTNLLTVYIFAGPSLNLKLPGACTNHIP-FT 61

Query: 209 FFDSETLLHELNSTQAKLSSSQTEMVELRRRLMTSN 316
            +DS  LL ELNST+ +L++S   + +L ++L ++N
Sbjct: 62  LWDSNILLRELNSTKEQLAASTLLISDLHQKLNSTN 97


>ref|XP_002328742.1| predicted protein [Populus trichocarpa] gi|222839040|gb|EEE77391.1|
           predicted protein [Populus trichocarpa]
          Length = 450

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
 Frame = +2

Query: 38  MGGMDDYHRKPSQQQSSSIRNKLKIVLLVLSTNILTFYLVAGPSANFKL----SKYAPKL 205
           + G++DY +K   QQ    + KLK+ +LV+ TN+LT Y+   PS N+K     SK    L
Sbjct: 2   VNGVEDYPKKHVHQQQLHTKYKLKMFVLVILTNLLTMYIFTSPSFNWKPFPLGSKNHISL 61

Query: 206 QFFDSETLLHELNSTQAKLSSSQTEMVELRRRLMTSN 316
              D  TLL EL++T+ +L+ S + + E  ++L ++N
Sbjct: 62  PLGDPTTLLDELSATKEQLAISHSLIAEFHKKLNSTN 98


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