BLASTX nr result

ID: Dioscorea21_contig00037452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037452
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACP30592.1| disease resistance protein [Brassica rapa subsp. ...    57   1e-06
ref|XP_003632805.1| PREDICTED: probable disease resistance prote...    57   2e-06
ref|XP_002281592.1| PREDICTED: probable disease resistance prote...    55   5e-06

>gb|ACP30592.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 852

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 45/129 (34%), Positives = 73/129 (56%), Gaps = 7/129 (5%)
 Frame = -3

Query: 372 LRQFSKWEAGNWKETELI------SFKGTNFNKTLQKLLSDQNINEKGQVSCASTSPRYP 211
           LR+ + W  G  +E + +      SF   + N ++ + +S ++ N+  ++SC   SP+ P
Sbjct: 482 LREMALW-IGKEEEKQCVKSGVKLSFIPDDINWSVSRRISLRS-NQIKKISC---SPKCP 536

Query: 210 NLQSLFLEGYSKSDHMSRQFVVNFFPHMPSLTHLNLS-GIPITGLSKEIRVLVNLRYLNI 34
           NL +LFL      D+M +     FF  MPSL  L+LS  + +  L +EI  L++L+YLN+
Sbjct: 537 NLSTLFL-----GDNMLKVIPGEFFQFMPSLVVLDLSRNLILLELPEEICSLISLQYLNL 591

Query: 33  SKTGIQSLP 7
           S+T I SLP
Sbjct: 592 SRTRISSLP 600


>ref|XP_003632805.1| PREDICTED: probable disease resistance protein At1g12280-like
           [Vitis vinifera]
          Length = 905

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/82 (42%), Positives = 49/82 (59%)
 Frame = -3

Query: 246 QVSCASTSPRYPNLQSLFLEGYSKSDHMSRQFVVNFFPHMPSLTHLNLSGIPITGLSKEI 67
           Q+   + SP+ PNL +LFL     +D+  +     FF  MPSL  L+LS   IT L + I
Sbjct: 523 QIEELTGSPKCPNLSTLFL-----ADNSLKMISDTFFQFMPSLRVLDLSKNSITELPRGI 577

Query: 66  RVLVNLRYLNISKTGIQSLPSE 1
             LV+L+YLN+S+T I+ LP E
Sbjct: 578 SNLVSLQYLNLSQTNIKELPIE 599


>ref|XP_002281592.1| PREDICTED: probable disease resistance protein At5g63020-like
           [Vitis vinifera]
          Length = 893

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 33/82 (40%), Positives = 49/82 (59%)
 Frame = -3

Query: 246 QVSCASTSPRYPNLQSLFLEGYSKSDHMSRQFVVNFFPHMPSLTHLNLSGIPITGLSKEI 67
           Q+   + SP  PNL +LFL+     D+  +    +FF  MP+L  L+LS   +T L + I
Sbjct: 523 QIEKLTGSPNCPNLSTLFLQ-----DNSLKMITDSFFQFMPNLRVLDLSRNAMTELPQGI 577

Query: 66  RVLVNLRYLNISKTGIQSLPSE 1
             LV+L+YLN+S+T I+ LP E
Sbjct: 578 SNLVSLQYLNLSQTNIKELPIE 599


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