BLASTX nr result

ID: Dioscorea21_contig00037419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037419
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]    70   2e-10
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]    69   4e-10
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]    67   1e-09
gb|ABR67407.1| integrase [Cucumis melo subsp. melo]                    65   4e-09
emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]    65   6e-09

>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
          Length = 1183

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/76 (43%), Positives = 47/76 (61%)
 Frame = -3

Query: 230 SSGSLDELSDNSPPRKMRSLTDVYDSCVFALYAGDPLLYRDAMAHKEWQEAMDTEMEAIR 51
           SS S  + S+ +PPRK RSL D+Y++    L+  DP  + +A+  +EW  AM  E+ AI 
Sbjct: 708 SSSSSSQSSEETPPRKFRSLRDIYETTQ-VLFVADPTTFEEAVEKEEWXSAMKEEIAAIE 766

Query: 50  TNKTWELTELPPGRKV 3
            N+TWEL ELP  + V
Sbjct: 767 KNETWELVELPEDKNV 782


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/76 (43%), Positives = 47/76 (61%)
 Frame = -3

Query: 230 SSGSLDELSDNSPPRKMRSLTDVYDSCVFALYAGDPLLYRDAMAHKEWQEAMDTEMEAIR 51
           SS S  + S+ +PPRK RSL D+Y++    L+  DP  + +A+  +EW  AM  E+ AI 
Sbjct: 774 SSSSSSQSSEETPPRKFRSLRDIYETTQ-VLFVADPTTFEEAVEKEEWCSAMKEEIVAIE 832

Query: 50  TNKTWELTELPPGRKV 3
            N+TWEL ELP  + V
Sbjct: 833 KNETWELVELPEDKNV 848


>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/76 (42%), Positives = 46/76 (60%)
 Frame = -3

Query: 230  SSGSLDELSDNSPPRKMRSLTDVYDSCVFALYAGDPLLYRDAMAHKEWQEAMDTEMEAIR 51
            S  S  + S+ +PPRK RSL D+Y++    L+  DP  + +A+  +EW  AM  E+ AI 
Sbjct: 885  SXSSSSQSSEETPPRKFRSLRDIYETTQ-VLFVADPTTFEEAVEKEEWCSAMKEEIAAIE 943

Query: 50   TNKTWELTELPPGRKV 3
             N+TWEL ELP  + V
Sbjct: 944  KNETWELVELPEDKNV 959


>gb|ABR67407.1| integrase [Cucumis melo subsp. melo]
          Length = 1281

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 37/89 (41%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
 Frame = -3

Query: 242  SSVQSSGSLDELSDNSPPRKMRSLTDVYDS---------CVFALYAG-DPLLYRDAMAHK 93
            SS  SS S DE+S    PR+MRS+ ++Y++           FAL+AG  P+ + +A+  +
Sbjct: 755  SSTSSSTSNDEIS----PRRMRSIQEIYNNTNRINVDHFANFALFAGVGPVTFDEAIQDE 810

Query: 92   EWQEAMDTEMEAIRTNKTWELTELPPGRK 6
            +W+ AMD E++AIR N+TWEL ELP  ++
Sbjct: 811  KWKIAMDQEIDAIRRNETWELMELPTNKQ 839


>emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
          Length = 1424

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/84 (38%), Positives = 53/84 (63%)
 Frame = -3

Query: 254  VPGYSSVQSSGSLDELSDNSPPRKMRSLTDVYDSCVFALYAGDPLLYRDAMAHKEWQEAM 75
            VP   S++S  S    S +S PRKMRSLTDVY+ C   +   +P  + +A+  ++W++AM
Sbjct: 863  VPLSPSIESPTSXSS-SPSSTPRKMRSLTDVYERCNLCIV--EPQSFEEAIKDEDWRKAM 919

Query: 74   DTEMEAIRTNKTWELTELPPGRKV 3
            + E++ I  N+TW+L E P  +++
Sbjct: 920  EKEIDVIEKNETWQLVEKPKDKEI 943


Top