BLASTX nr result
ID: Dioscorea21_contig00037410
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00037410
(318 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002463624.1| hypothetical protein SORBIDRAFT_01g003150 [S... 154 9e-36
gb|AFW67143.1| hypothetical protein ZEAMMB73_912965 [Zea mays] 152 4e-35
ref|XP_003559233.1| PREDICTED: pentatricopeptide repeat-containi... 150 1e-34
gb|EAY92377.1| hypothetical protein OsI_14107 [Oryza sativa Indi... 146 2e-33
ref|NP_001051728.1| Os03g0821700 [Oryza sativa Japonica Group] g... 146 2e-33
>ref|XP_002463624.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
gi|241917478|gb|EER90622.1| hypothetical protein
SORBIDRAFT_01g003150 [Sorghum bicolor]
Length = 607
Score = 154 bits (388), Expect = 9e-36
Identities = 73/105 (69%), Positives = 89/105 (84%)
Frame = +1
Query: 4 KTNVVTWSAMIGGYVRSGLSNEAVALFREMQVSGVRPDEVTVVAVLSACADLGALELGHW 183
K++VVTWSAMIGGYVR GLS++AV LFREMQ SGVRPDEVTV+ VL+A ADLGALEL W
Sbjct: 197 KSSVVTWSAMIGGYVRGGLSSDAVGLFREMQASGVRPDEVTVIGVLAAAADLGALELARW 256
Query: 184 IKSFIERERIPKTLPLCNALLDALAKCGDIDGALKMFVEMPERSI 318
+ F+ERE I K++ LCNAL+DALAKCGD+DGA+ +F M ER++
Sbjct: 257 VGRFVEREGIGKSVTLCNALIDALAKCGDVDGAVAVFQGMEERTV 301
Score = 58.5 bits (140), Expect = 5e-07
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Frame = +1
Query: 13 VVTWSAMIGGYVRSGLSNEAVALFREMQVSGVRPDEVTVVAVLSACADLGALELGH-WIK 189
VV+W+++I G EAVA+F M+ +GVRPD+V + VL+AC+ G ++ G+ +
Sbjct: 301 VVSWTSVIDALAMEGRGKEAVAVFEAMKTAGVRPDDVVFIGVLTACSHAGMVDEGYGYFD 360
Query: 190 SFIERERIPKTLPLCNALLDALAKCGDIDGALKMFVEMP 306
S I + ++D + G ++ A++ MP
Sbjct: 361 SMKMEYGIDPKIEHYGCMVDMFGRAGMVERAMEFIHTMP 399
>gb|AFW67143.1| hypothetical protein ZEAMMB73_912965 [Zea mays]
Length = 619
Score = 152 bits (383), Expect = 4e-35
Identities = 72/105 (68%), Positives = 89/105 (84%)
Frame = +1
Query: 4 KTNVVTWSAMIGGYVRSGLSNEAVALFREMQVSGVRPDEVTVVAVLSACADLGALELGHW 183
K++ VTWSAMIGGYVRSGLS++AV LFREMQ SGVRPDEVT++ VL+A ADLGALEL W
Sbjct: 209 KSSAVTWSAMIGGYVRSGLSSDAVGLFREMQASGVRPDEVTMIGVLAAAADLGALELARW 268
Query: 184 IKSFIERERIPKTLPLCNALLDALAKCGDIDGALKMFVEMPERSI 318
+ F+E+E I K++ LCNAL+DALAKCGD+DGA+ +F M ER+I
Sbjct: 269 VGRFVEKEGIGKSVTLCNALIDALAKCGDLDGAMAVFQGMKERTI 313
Score = 61.2 bits (147), Expect = 8e-08
Identities = 30/99 (30%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Frame = +1
Query: 13 VVTWSAMIGGYVRSGLSNEAVALFREMQVSGVRPDEVTVVAVLSACADLGALELGH-WIK 189
+V+W+++I G EAVA+F EM+ +GVRPD+V + VL+AC+ G ++ G+ + +
Sbjct: 313 IVSWTSVIDALAMEGRGKEAVAVFEEMKTAGVRPDDVAFIGVLTACSHAGMVDEGYGYFE 372
Query: 190 SFIERERIPKTLPLCNALLDALAKCGDIDGALKMFVEMP 306
S I + ++D + G ++ A++ +MP
Sbjct: 373 SMRMAYGIDPKIEHYGCMVDMFGRAGMVERAMEFVHKMP 411
>ref|XP_003559233.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 611
Score = 150 bits (378), Expect = 1e-34
Identities = 71/106 (66%), Positives = 88/106 (83%)
Frame = +1
Query: 1 PKTNVVTWSAMIGGYVRSGLSNEAVALFREMQVSGVRPDEVTVVAVLSACADLGALELGH 180
P+ + VTWSAMIGGYVR+GLS++AV LFR MQVSGVRPDEVTV+ VL+A ADLGALEL
Sbjct: 200 PRESAVTWSAMIGGYVRAGLSSDAVVLFRGMQVSGVRPDEVTVIGVLAAAADLGALELTR 259
Query: 181 WIKSFIERERIPKTLPLCNALLDALAKCGDIDGALKMFVEMPERSI 318
W+ F+ERE I K++ LCNAL+D LAKCGD+DGA+ +F M ER++
Sbjct: 260 WVGRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMEERTV 305
>gb|EAY92377.1| hypothetical protein OsI_14107 [Oryza sativa Indica Group]
Length = 602
Score = 146 bits (369), Expect = 2e-33
Identities = 68/106 (64%), Positives = 86/106 (81%)
Frame = +1
Query: 1 PKTNVVTWSAMIGGYVRSGLSNEAVALFREMQVSGVRPDEVTVVAVLSACADLGALELGH 180
PK + VTWSAMIGGYVR GLS++AV LFREMQ +GV+ DEVTV+ VL+A DLGALEL
Sbjct: 191 PKESAVTWSAMIGGYVRGGLSSDAVELFREMQANGVQADEVTVIGVLAAATDLGALELAR 250
Query: 181 WIKSFIERERIPKTLPLCNALLDALAKCGDIDGALKMFVEMPERSI 318
W++ F+ERE I K++ LCNAL+D LAKCGD+DGA+ +F M +RS+
Sbjct: 251 WVRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSV 296
Score = 55.8 bits (133), Expect = 4e-06
Identities = 31/101 (30%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Frame = +1
Query: 10 NVVTWSAMIGGYVRSGLSNEAVALFREMQVSGVRPDEVTVVAVLSACADLGALE--LGHW 183
+VV+W+++I G EAV +F EM+V+GV PD+V + VL+AC+ G ++ G++
Sbjct: 295 SVVSWTSVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVAFIGVLTACSHAGMVDEGCGYF 354
Query: 184 IKSFIERERIPKTLPLCNALLDALAKCGDIDGALKMFVEMP 306
+E PK + ++D + G ++ A++ MP
Sbjct: 355 DAMKVEYGIEPK-IEHYGCMVDMFGRAGMVERAMEFVRTMP 394
>ref|NP_001051728.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|29124127|gb|AAO65868.1| hypothetical protein [Oryza
sativa Japonica Group] gi|108711802|gb|ABF99597.1|
expressed protein [Oryza sativa Japonica Group]
gi|113550199|dbj|BAF13642.1| Os03g0821700 [Oryza sativa
Japonica Group] gi|125588431|gb|EAZ29095.1| hypothetical
protein OsJ_13153 [Oryza sativa Japonica Group]
gi|215736898|dbj|BAG95827.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 602
Score = 146 bits (368), Expect = 2e-33
Identities = 68/106 (64%), Positives = 86/106 (81%)
Frame = +1
Query: 1 PKTNVVTWSAMIGGYVRSGLSNEAVALFREMQVSGVRPDEVTVVAVLSACADLGALELGH 180
PK + VTWSAMIGGYVR GLS++AV LFREMQ +GV+ DEVTV+ VL+A DLGALEL
Sbjct: 191 PKESAVTWSAMIGGYVRGGLSSDAVDLFREMQANGVQADEVTVIGVLAAATDLGALELAR 250
Query: 181 WIKSFIERERIPKTLPLCNALLDALAKCGDIDGALKMFVEMPERSI 318
W++ F+ERE I K++ LCNAL+D LAKCGD+DGA+ +F M +RS+
Sbjct: 251 WVRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSV 296
Score = 55.8 bits (133), Expect = 4e-06
Identities = 31/101 (30%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Frame = +1
Query: 10 NVVTWSAMIGGYVRSGLSNEAVALFREMQVSGVRPDEVTVVAVLSACADLGALE--LGHW 183
+VV+W+++I G EAV +F EM+V+GV PD+V + VL+AC+ G ++ G++
Sbjct: 295 SVVSWTSVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVAFIGVLTACSHAGMVDEGCGYF 354
Query: 184 IKSFIERERIPKTLPLCNALLDALAKCGDIDGALKMFVEMP 306
+E PK + ++D + G ++ A++ MP
Sbjct: 355 DAMKVEYGIEPK-IEHYGCMVDMFGRAGMVERAMEFVRTMP 394