BLASTX nr result

ID: Dioscorea21_contig00037398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037398
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28998.3| unnamed protein product [Vitis vinifera]              150   1e-34
ref|XP_002267326.1| PREDICTED: pentatricopeptide repeat-containi...   150   1e-34
ref|XP_002441696.1| hypothetical protein SORBIDRAFT_08g000870 [S...   135   3e-30
gb|ABA96204.1| pentatricopeptide, putative [Oryza sativa Japonic...   134   8e-30
gb|EAZ19413.1| hypothetical protein OsJ_34968 [Oryza sativa Japo...   134   8e-30

>emb|CBI28998.3| unnamed protein product [Vitis vinifera]
          Length = 732

 Score =  150 bits (379), Expect = 1e-34
 Identities = 67/99 (67%), Positives = 80/99 (80%)
 Frame = -3

Query: 302 ELFEKMEHVIVSPSHTTFVAVISACNHLGLVEEGQLFFNSISTDYGMSPSKDNFACLVDL 123
           E FEKM+   + PS  TFV+VISAC+HLGLVE+G +FF S++ DYGM PS DN+ CLVDL
Sbjct: 574 ETFEKMKLATLEPSQATFVSVISACSHLGLVEQGDIFFKSMNLDYGMDPSPDNYGCLVDL 633

Query: 122 LARNGLLEKARHVIECMPFEPWPAIWRSLLNGSRIHGDK 6
            +RNG LE A+H+IE MPF PWPAIWRSLLNG RIHG+K
Sbjct: 634 FSRNGFLEDAKHIIETMPFPPWPAIWRSLLNGCRIHGNK 672


>ref|XP_002267326.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Vitis vinifera]
          Length = 708

 Score =  150 bits (379), Expect = 1e-34
 Identities = 67/99 (67%), Positives = 80/99 (80%)
 Frame = -3

Query: 302 ELFEKMEHVIVSPSHTTFVAVISACNHLGLVEEGQLFFNSISTDYGMSPSKDNFACLVDL 123
           E FEKM+   + PS  TFV+VISAC+HLGLVE+G +FF S++ DYGM PS DN+ CLVDL
Sbjct: 550 ETFEKMKLATLEPSQATFVSVISACSHLGLVEQGDIFFKSMNLDYGMDPSPDNYGCLVDL 609

Query: 122 LARNGLLEKARHVIECMPFEPWPAIWRSLLNGSRIHGDK 6
            +RNG LE A+H+IE MPF PWPAIWRSLLNG RIHG+K
Sbjct: 610 FSRNGFLEDAKHIIETMPFPPWPAIWRSLLNGCRIHGNK 648


>ref|XP_002441696.1| hypothetical protein SORBIDRAFT_08g000870 [Sorghum bicolor]
           gi|241942389|gb|EES15534.1| hypothetical protein
           SORBIDRAFT_08g000870 [Sorghum bicolor]
          Length = 810

 Score =  135 bits (340), Expect = 3e-30
 Identities = 58/98 (59%), Positives = 83/98 (84%)
 Frame = -3

Query: 299 LFEKMEHVIVSPSHTTFVAVISACNHLGLVEEGQLFFNSISTDYGMSPSKDNFACLVDLL 120
           L++ M  + ++P+  TF+AVISAC+HLGLVE+G+L F+S+ + +GM+P++ N+ CL+DLL
Sbjct: 653 LYQDMTQLQLAPTPATFIAVISACSHLGLVEQGKLLFSSMLSAHGMNPTRANYTCLIDLL 712

Query: 119 ARNGLLEKARHVIECMPFEPWPAIWRSLLNGSRIHGDK 6
           AR GLLE+A+ VIE MPF+PWPA+WRSL+NG RIHG+K
Sbjct: 713 ARRGLLEEAKGVIEAMPFQPWPAVWRSLMNGCRIHGNK 750


>gb|ABA96204.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 887

 Score =  134 bits (337), Expect = 8e-30
 Identities = 58/98 (59%), Positives = 83/98 (84%)
 Frame = -3

Query: 299 LFEKMEHVIVSPSHTTFVAVISACNHLGLVEEGQLFFNSISTDYGMSPSKDNFACLVDLL 120
           L+E+M    ++P+  TFVA++SAC+HLGLVE+G+L F+++ + YGM P++ N+ACLVDLL
Sbjct: 589 LYEEMTKAKLNPTPATFVAILSACSHLGLVEQGKLAFSTMLSAYGMHPARANYACLVDLL 648

Query: 119 ARNGLLEKARHVIECMPFEPWPAIWRSLLNGSRIHGDK 6
           AR GLL++A+ VI+ MPF+PWPA+WRSL+NG RIHG+K
Sbjct: 649 ARKGLLDEAKGVIDAMPFQPWPAVWRSLVNGCRIHGNK 686


>gb|EAZ19413.1| hypothetical protein OsJ_34968 [Oryza sativa Japonica Group]
          Length = 786

 Score =  134 bits (337), Expect = 8e-30
 Identities = 58/98 (59%), Positives = 83/98 (84%)
 Frame = -3

Query: 299 LFEKMEHVIVSPSHTTFVAVISACNHLGLVEEGQLFFNSISTDYGMSPSKDNFACLVDLL 120
           L+E+M    ++P+  TFVA++SAC+HLGLVE+G+L F+++ + YGM P++ N+ACLVDLL
Sbjct: 488 LYEEMTKAKLNPTPATFVAILSACSHLGLVEQGKLAFSTMLSAYGMHPARANYACLVDLL 547

Query: 119 ARNGLLEKARHVIECMPFEPWPAIWRSLLNGSRIHGDK 6
           AR GLL++A+ VI+ MPF+PWPA+WRSL+NG RIHG+K
Sbjct: 548 ARKGLLDEAKGVIDAMPFQPWPAVWRSLVNGCRIHGNK 585


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