BLASTX nr result

ID: Dioscorea21_contig00037396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037396
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001055055.2| Os05g0269800 [Oryza sativa Japonica Group] g...    58   9e-07
gb|AAV43964.1| putative polyprotein [Oryza sativa Japonica Group]      58   9e-07
gb|AAM23241.1|AC092553_7 Putative transposase [Oryza sativa Japo...    56   3e-06
gb|ABA94103.1| transposon protein, putative, CACTA, En/Spm sub-c...    55   5e-06
gb|EAZ18625.1| hypothetical protein OsJ_34147 [Oryza sativa Japo...    55   5e-06

>ref|NP_001055055.2| Os05g0269800 [Oryza sativa Japonica Group]
           gi|255676197|dbj|BAF16969.2| Os05g0269800 [Oryza sativa
           Japonica Group]
          Length = 529

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/61 (49%), Positives = 38/61 (62%)
 Frame = -3

Query: 200 TPERHNLAGKKASTNVRWTAMMTSFMLTSLVEQANLGLKSDKGFKNVALNAVARAVSARF 21
           T E  N +GK  ST+  WT+ M+SFML+ L      G ++  GFK V LNA ARAV+ RF
Sbjct: 248 TQEMDNNSGKGGSTHASWTSAMSSFMLSHLANVVAGGTRTSSGFKAVHLNACARAVNERF 307

Query: 20  N 18
           N
Sbjct: 308 N 308


>gb|AAV43964.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 561

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/61 (49%), Positives = 38/61 (62%)
 Frame = -3

Query: 200 TPERHNLAGKKASTNVRWTAMMTSFMLTSLVEQANLGLKSDKGFKNVALNAVARAVSARF 21
           T E  N +GK  ST+  WT+ M+SFML+ L      G ++  GFK V LNA ARAV+ RF
Sbjct: 280 TQEMDNNSGKGGSTHASWTSAMSSFMLSHLANVVAGGTRTSSGFKAVHLNACARAVNERF 339

Query: 20  N 18
           N
Sbjct: 340 N 340


>gb|AAM23241.1|AC092553_7 Putative transposase [Oryza sativa Japonica Group]
           gi|21326484|gb|AAM47612.1|AC122147_1 Putative
           transposase [Oryza sativa Japonica Group]
           gi|110288571|gb|ABB46678.2| transposon protein,
           putative, CACTA, En/Spm sub-class [Oryza sativa Japonica
           Group]
          Length = 535

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/59 (49%), Positives = 37/59 (62%)
 Frame = -3

Query: 194 ERHNLAGKKASTNVRWTAMMTSFMLTSLVEQANLGLKSDKGFKNVALNAVARAVSARFN 18
           E  N +GK  ST+  WT+ M+SFML+ L      G ++  GFK V LNA ARAV+ RFN
Sbjct: 256 EMDNNSGKGGSTHASWTSAMSSFMLSHLANVVAGGTRTSSGFKAVHLNACARAVNERFN 314


>gb|ABA94103.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
           Japonica Group]
          Length = 428

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/50 (54%), Positives = 34/50 (68%)
 Frame = -3

Query: 155 VRWTAMMTSFMLTSLVEQANLGLKSDKGFKNVALNAVARAVSARFNLAVS 6
           +RWT  M+SFML  +VE    G+K+DKGFK V LN VAR VS R+   +S
Sbjct: 172 LRWTTNMSSFMLRRMVELIAQGVKTDKGFKEVHLNQVARTVSDRYGFEIS 221


>gb|EAZ18625.1| hypothetical protein OsJ_34147 [Oryza sativa Japonica Group]
          Length = 274

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/50 (54%), Positives = 34/50 (68%)
 Frame = -3

Query: 155 VRWTAMMTSFMLTSLVEQANLGLKSDKGFKNVALNAVARAVSARFNLAVS 6
           +RWT  M+SFML  +VE    G+K+DKGFK V LN VAR VS R+   +S
Sbjct: 18  LRWTTNMSSFMLRRMVELIAQGVKTDKGFKEVHLNQVARTVSDRYGFEIS 67


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