BLASTX nr result

ID: Dioscorea21_contig00037392 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037392
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEK20778.1| cyclin dependent kinase regulator [Musa acuminata...    60   2e-07
ref|XP_003570596.1| PREDICTED: cyclin-D3-1-like [Brachypodium di...    57   1e-06
emb|CBI18712.3| unnamed protein product [Vitis vinifera]               55   5e-06
ref|XP_002268586.1| PREDICTED: cyclin-D4-1-like [Vitis vinifera]       55   5e-06
emb|CAN69657.1| hypothetical protein VITISV_013007 [Vitis vinifera]    55   5e-06

>gb|AEK20778.1| cyclin dependent kinase regulator [Musa acuminata AAA Group]
          Length = 344

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 34/68 (50%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
 Frame = -2

Query: 275 VIRCYAVIQDNAVMINSFFDNASPLVSSVPQSPIGVLDAACLSYKSDELTTTRH------ 114
           V+ CY VIQD  +M      +    VS VPQSP+GVL AACLSYKSD+ T   H      
Sbjct: 274 VLGCYEVIQDKVLMRKQSAKDLVSSVSCVPQSPVGVLHAACLSYKSDDATVVSHATCLGL 333

Query: 113 --DSKRRK 96
              SKRRK
Sbjct: 334 SPASKRRK 341


>ref|XP_003570596.1| PREDICTED: cyclin-D3-1-like [Brachypodium distachyon]
          Length = 352

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/51 (58%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
 Frame = -2

Query: 275 VIRCYAVIQDNAVMINSFFDNASPLVSSVPQSPIGVLD-AACLSYKSDELT 126
           V+RCY +IQDN  M N    +A   + SVPQSPIGVLD AACLS +SD+ T
Sbjct: 281 VLRCYELIQDNITMGNIVLKSAGSSIFSVPQSPIGVLDAAACLSQQSDDTT 331


>emb|CBI18712.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 8/69 (11%)
 Frame = -2

Query: 275 VIRCYAVIQDNAVMINSFFDNASPLVSSVPQSPIGVLDAACLSYKSDELTT--------T 120
           V++C  +IQ NA ++ +  + A    +SVP SP+GVLDAAC SYKSD+LT          
Sbjct: 277 VLKCVQLIQ-NAALLGASTEVAGASAASVPLSPVGVLDAACWSYKSDDLTVGSCANSSHN 335

Query: 119 RHDSKRRKL 93
             D KRRKL
Sbjct: 336 TPDGKRRKL 344


>ref|XP_002268586.1| PREDICTED: cyclin-D4-1-like [Vitis vinifera]
          Length = 352

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 8/69 (11%)
 Frame = -2

Query: 275 VIRCYAVIQDNAVMINSFFDNASPLVSSVPQSPIGVLDAACLSYKSDELTT--------T 120
           V++C  +IQ NA ++ +  + A    +SVP SP+GVLDAAC SYKSD+LT          
Sbjct: 276 VLKCVQLIQ-NAALLGASTEVAGASAASVPLSPVGVLDAACWSYKSDDLTVGSCANSSHN 334

Query: 119 RHDSKRRKL 93
             D KRRKL
Sbjct: 335 TPDGKRRKL 343


>emb|CAN69657.1| hypothetical protein VITISV_013007 [Vitis vinifera]
          Length = 88

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 8/69 (11%)
 Frame = -2

Query: 275 VIRCYAVIQDNAVMINSFFDNASPLVSSVPQSPIGVLDAACLSYKSDELTT--------T 120
           V++C  +IQ NA ++ +  + A    +SVP SP+GVLDAAC SYKSD+LT          
Sbjct: 12  VLKCVQLIQ-NAALLGASTEVAGASAASVPLSPVGVLDAACWSYKSDDLTVGSCANSSHN 70

Query: 119 RHDSKRRKL 93
             D KRRKL
Sbjct: 71  TPDGKRRKL 79


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