BLASTX nr result

ID: Dioscorea21_contig00037379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037379
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24229.3| unnamed protein product [Vitis vinifera]              207   7e-52
ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containi...   207   7e-52
emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]   207   7e-52
ref|XP_003588887.1| Pentatricopeptide repeat-containing protein ...   202   2e-50
ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containi...   202   2e-50

>emb|CBI24229.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score =  207 bits (527), Expect = 7e-52
 Identities = 93/154 (60%), Positives = 119/154 (77%)
 Frame = -3

Query: 463 ACNHGGLVEEGCHYFKQMTDEYAIKPALEHYSCLIDLLGRSGRLKEAFDMFSNMQYIKAD 284
           AC+H GLV+EGC+YF QM  EY  KPA+EHYSCLIDLLGR GRL+EA+++      I+ D
Sbjct: 372 ACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIRED 431

Query: 283 AGLLGSLFAACSLHKNLELGVKVAEQLIEINPDDHSTYVVLANMYASSGRWDKVRKVRTE 104
            GLL +LF+AC LHK L+LG ++   LIE +PDD STY++L+NMYAS  +WD+VRKVR +
Sbjct: 432 VGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLK 491

Query: 103 MKDRGLRKNPGCSWIEIDKKIHQFFAEDDSHQHA 2
           +K+ GL+KNPGCSWIE+ K+IH F  ED SH  A
Sbjct: 492 IKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQA 525


>ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score =  207 bits (527), Expect = 7e-52
 Identities = 93/154 (60%), Positives = 119/154 (77%)
 Frame = -3

Query: 463 ACNHGGLVEEGCHYFKQMTDEYAIKPALEHYSCLIDLLGRSGRLKEAFDMFSNMQYIKAD 284
           AC+H GLV+EGC+YF QM  EY  KPA+EHYSCLIDLLGR GRL+EA+++      I+ D
Sbjct: 519 ACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIRED 578

Query: 283 AGLLGSLFAACSLHKNLELGVKVAEQLIEINPDDHSTYVVLANMYASSGRWDKVRKVRTE 104
            GLL +LF+AC LHK L+LG ++   LIE +PDD STY++L+NMYAS  +WD+VRKVR +
Sbjct: 579 VGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLK 638

Query: 103 MKDRGLRKNPGCSWIEIDKKIHQFFAEDDSHQHA 2
           +K+ GL+KNPGCSWIE+ K+IH F  ED SH  A
Sbjct: 639 IKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQA 672


>emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
          Length = 886

 Score =  207 bits (527), Expect = 7e-52
 Identities = 93/154 (60%), Positives = 119/154 (77%)
 Frame = -3

Query: 463  ACNHGGLVEEGCHYFKQMTDEYAIKPALEHYSCLIDLLGRSGRLKEAFDMFSNMQYIKAD 284
            AC+H GLV+EGC+YF QM  EY  KPA+EHYSCLIDLLGR GRL+EA+++      I+ D
Sbjct: 711  ACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIRED 770

Query: 283  AGLLGSLFAACSLHKNLELGVKVAEQLIEINPDDHSTYVVLANMYASSGRWDKVRKVRTE 104
             GLL +LF+AC LHK L+LG ++   LIE +PDD STY++L+NMYAS  +WD+VRKVR +
Sbjct: 771  VGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLK 830

Query: 103  MKDRGLRKNPGCSWIEIDKKIHQFFAEDDSHQHA 2
            +K+ GL+KNPGCSWIE+ K+IH F  ED SH  A
Sbjct: 831  IKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQA 864


>ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355477935|gb|AES59138.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 697

 Score =  202 bits (515), Expect = 2e-50
 Identities = 92/153 (60%), Positives = 122/153 (79%)
 Frame = -3

Query: 463 ACNHGGLVEEGCHYFKQMTDEYAIKPALEHYSCLIDLLGRSGRLKEAFDMFSNMQYIKAD 284
           AC+H GLV++G ++F QM + Y I P +EHYSCLI LLGR+GRL EA+++  +   I  D
Sbjct: 519 ACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDD 578

Query: 283 AGLLGSLFAACSLHKNLELGVKVAEQLIEINPDDHSTYVVLANMYASSGRWDKVRKVRTE 104
             LL +LF+AC LHKNL+LGV++AE LI+ +PDD STY++L+NMYAS G+WD+VR VR++
Sbjct: 579 FQLLSTLFSACRLHKNLDLGVEIAENLIDKDPDDSSTYIILSNMYASFGKWDEVRMVRSK 638

Query: 103 MKDRGLRKNPGCSWIEIDKKIHQFFAEDDSHQH 5
           MKD GL+KNPGCSWIEI++KI  FF ED+SH H
Sbjct: 639 MKDLGLKKNPGCSWIEINEKIVPFFVEDNSHYH 671


>ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  202 bits (514), Expect = 2e-50
 Identities = 90/153 (58%), Positives = 121/153 (79%)
 Frame = -3

Query: 463 ACNHGGLVEEGCHYFKQMTDEYAIKPALEHYSCLIDLLGRSGRLKEAFDMFSNMQYIKAD 284
           AC H GLV+EGC+YF QM + Y I P +EHYSCLIDLLGR+GRL EA+++      I+ D
Sbjct: 519 ACGHAGLVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDD 578

Query: 283 AGLLGSLFAACSLHKNLELGVKVAEQLIEINPDDHSTYVVLANMYASSGRWDKVRKVRTE 104
             LL +LF+AC LH+N++LG ++A  LI+ +PDD STY++L+NMYAS+ +WD+VR VR++
Sbjct: 579 VELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSK 638

Query: 103 MKDRGLRKNPGCSWIEIDKKIHQFFAEDDSHQH 5
           MK+ GL+KNPGCSWIEI++KI  FF ED+SH H
Sbjct: 639 MKELGLKKNPGCSWIEINQKILPFFVEDNSHLH 671


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