BLASTX nr result

ID: Dioscorea21_contig00037360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037360
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   121   7e-26
emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]   117   8e-25
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]   116   2e-24
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]   116   2e-24
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]   114   6e-24

>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  121 bits (303), Expect = 7e-26
 Identities = 57/106 (53%), Positives = 73/106 (68%)
 Frame = +2

Query: 2   KKLNQSMTWHQRFGHLNHQSLKQLAAKDMVTGLPEIGELDPCDVCVLEKHARNPFGHQSG 181
           K+ N++  WH R+GHLN   LK L  KDMV GLP I ELD C+ C+  K  R  F    G
Sbjct: 437 KEKNETNLWHLRYGHLNVNWLKLLVQKDMVIGLPNIKELDLCEGCIYGKQTRKSF--PVG 494

Query: 182 KSRRSTEKLQRVHMDVCGPMHVESVGGNRYFLLFVDDYTRLTWIYF 319
           KS R+T  L+ VH D+CGPM +ES+GG+RYFL+F DDY+R +W+YF
Sbjct: 495 KSWRATTCLELVHADLCGPMKMESLGGSRYFLMFTDDYSRFSWVYF 540


>emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]
          Length = 1109

 Score =  117 bits (294), Expect = 8e-25
 Identities = 50/106 (47%), Positives = 77/106 (72%)
 Frame = +2

Query: 2   KKLNQSMTWHQRFGHLNHQSLKQLAAKDMVTGLPEIGELDPCDVCVLEKHARNPFGHQSG 181
           K+ ++S  WH R+GHLN + LK L+ K+MV GLP+I  ++ C+ C+  K ++ PF    G
Sbjct: 418 KETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKIDSVNVCEGCIYGKQSKKPF--PKG 475

Query: 182 KSRRSTEKLQRVHMDVCGPMHVESVGGNRYFLLFVDDYTRLTWIYF 319
           +SRR++  L+ +H D+CGPM + S GG+RYFLLF DD++R++W+YF
Sbjct: 476 RSRRASSCLEIIHADLCGPMQIASFGGSRYFLLFTDDHSRMSWVYF 521


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score =  116 bits (291), Expect = 2e-24
 Identities = 50/106 (47%), Positives = 76/106 (71%)
 Frame = +2

Query: 2   KKLNQSMTWHQRFGHLNHQSLKQLAAKDMVTGLPEIGELDPCDVCVLEKHARNPFGHQSG 181
           K+ ++S  WH R+GHLN + LK L+ K+MV GLP+I  ++ C+ C+  K ++ PF    G
Sbjct: 432 KETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKIDSVNVCEGCIYGKQSKKPF--PKG 489

Query: 182 KSRRSTEKLQRVHMDVCGPMHVESVGGNRYFLLFVDDYTRLTWIYF 319
           +SRR++  L+ +H D+CGPM   S GG+RYFLLF DD++R++W+YF
Sbjct: 490 RSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTDDHSRMSWVYF 535


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score =  116 bits (291), Expect = 2e-24
 Identities = 50/106 (47%), Positives = 76/106 (71%)
 Frame = +2

Query: 2   KKLNQSMTWHQRFGHLNHQSLKQLAAKDMVTGLPEIGELDPCDVCVLEKHARNPFGHQSG 181
           K+ ++S  WH R+GHLN + LK L+ K+MV GLP+I  ++ C+ C+  K ++ PF    G
Sbjct: 417 KETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKIDSVNVCEGCIYGKQSKKPF--PKG 474

Query: 182 KSRRSTEKLQRVHMDVCGPMHVESVGGNRYFLLFVDDYTRLTWIYF 319
           +SRR++  L+ +H D+CGPM   S GG+RYFLLF DD++R++W+YF
Sbjct: 475 RSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTDDHSRMSWVYF 520


>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
          Length = 1183

 Score =  114 bits (286), Expect = 6e-24
 Identities = 49/106 (46%), Positives = 76/106 (71%)
 Frame = +2

Query: 2   KKLNQSMTWHQRFGHLNHQSLKQLAAKDMVTGLPEIGELDPCDVCVLEKHARNPFGHQSG 181
           K+ ++S  WH R+GHLN + LK L+ K+MV GLP+I  ++ C+ C+  K ++ PF    G
Sbjct: 366 KETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKIDSVNVCEGCIYGKQSKKPF--PKG 423

Query: 182 KSRRSTEKLQRVHMDVCGPMHVESVGGNRYFLLFVDDYTRLTWIYF 319
           +SRR++  L+ +H D+CGPM   S GG+RYFLLF +D++R++W+YF
Sbjct: 424 RSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTNDHSRMSWVYF 469


Top