BLASTX nr result
ID: Dioscorea21_contig00037299
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00037299
(355 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containi... 124 6e-27
ref|XP_002300144.1| predicted protein [Populus trichocarpa] gi|2... 121 7e-26
ref|XP_002512857.1| pentatricopeptide repeat-containing protein,... 116 2e-24
ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226... 116 2e-24
ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212... 116 2e-24
>ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 124 bits (312), Expect = 6e-27
Identities = 65/124 (52%), Positives = 82/124 (66%), Gaps = 6/124 (4%)
Frame = -1
Query: 355 CHVVDDARKACDDTPVKNVVVWTSMIVGYVWNEAAREALHTFKCFFAEEGGSD------V 194
C + DAR D+ +N+V WTSMI GYV N+ A AL FK F EE GS+ V
Sbjct: 200 CGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCV 259
Query: 193 DYVAAVSALSACARIAERKVTRGFHGALVKLGLEMETGVGNTLMDAYAKCGVLDVARKVF 14
D +A VS LSAC+R++E+ +T G HG L+K G E + GV NTLMDAYAKCG L V+R+VF
Sbjct: 260 DPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVF 319
Query: 13 DEMS 2
D M+
Sbjct: 320 DGMA 323
Score = 70.1 bits (170), Expect = 2e-10
Identities = 35/117 (29%), Positives = 63/117 (53%)
Frame = -1
Query: 355 CHVVDDARKACDDTPVKNVVVWTSMIVGYVWNEAAREALHTFKCFFAEEGGSDVDYVAAV 176
C + +R+ D ++V+ W S+I Y N + E++ F ++G + + V
Sbjct: 309 CGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRM-VKDGEINYNAVTLS 367
Query: 175 SALSACARIAERKVTRGFHGALVKLGLEMETGVGNTLMDAYAKCGVLDVARKVFDEM 5
+ L ACA +++ + H ++K+GLE VG +++D Y KCG +++ARK FD M
Sbjct: 368 AVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRM 424
>ref|XP_002300144.1| predicted protein [Populus trichocarpa] gi|222847402|gb|EEE84949.1|
predicted protein [Populus trichocarpa]
Length = 666
Score = 121 bits (303), Expect = 7e-26
Identities = 60/125 (48%), Positives = 83/125 (66%), Gaps = 7/125 (5%)
Frame = -1
Query: 355 CHVVDDARKACDDTPVKNVVVWTSMIVGYVWNEAAREALHTFKCFF-------AEEGGSD 197
C + +AR D+ P +N+V WTS+I GYV N+ A EAL FK F EE G+
Sbjct: 130 CGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTS 189
Query: 196 VDYVAAVSALSACARIAERKVTRGFHGALVKLGLEMETGVGNTLMDAYAKCGVLDVARKV 17
VD VA +S LSAC+R++ + V+ G HG +K+GL+ GV NTL+DAYAKCG + ++RKV
Sbjct: 190 VDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKV 249
Query: 16 FDEMS 2
FD+M+
Sbjct: 250 FDDMA 254
Score = 65.1 bits (157), Expect = 6e-09
Identities = 38/117 (32%), Positives = 55/117 (47%)
Frame = -1
Query: 355 CHVVDDARKACDDTPVKNVVVWTSMIVGYVWNEAAREALHTFKCFFAEEGGSDVDYVAAV 176
C V +RK DD K+VV W SMI Y N + +A F + GG + V
Sbjct: 240 CGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGML-KAGGGKYNEVTLS 298
Query: 175 SALSACARIAERKVTRGFHGALVKLGLEMETGVGNTLMDAYAKCGVLDVARKVFDEM 5
+ L ACA +V H ++K+G + +++D Y KCG ++AR FD M
Sbjct: 299 TLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGM 355
>ref|XP_002512857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223547868|gb|EEF49360.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 454
Score = 116 bits (291), Expect = 2e-24
Identities = 60/124 (48%), Positives = 83/124 (66%), Gaps = 7/124 (5%)
Frame = -1
Query: 355 CHVVDDARKACDDTPVKNVVVWTSMIVGYVWNEAAREALHTFKCFFAEEGGSD------- 197
C + DAR D+ +N+V+WTSMI GY+ N+ A EAL FK F EE +
Sbjct: 130 CGRLSDARILFDEITHRNIVIWTSMITGYIQNDHAHEALLLFKQFLIEESERNEEKDEVL 189
Query: 196 VDYVAAVSALSACARIAERKVTRGFHGALVKLGLEMETGVGNTLMDAYAKCGVLDVARKV 17
+D VA VS LSAC+RI+ + +T+G HG +VK GL+ + G+ NTL+DAYAKCG + V+R+V
Sbjct: 190 MDSVAMVSVLSACSRISGKGMTKGVHGFVVKKGLDEDVGIENTLLDAYAKCGEVGVSRQV 249
Query: 16 FDEM 5
FDE+
Sbjct: 250 FDEI 253
Score = 63.5 bits (153), Expect = 2e-08
Identities = 37/117 (31%), Positives = 57/117 (48%)
Frame = -1
Query: 355 CHVVDDARKACDDTPVKNVVVWTSMIVGYVWNEAAREALHTFKCFFAEEGGSDVDYVAAV 176
C V +R+ D+ K+ + W SMI Y N + EA F + G + V
Sbjct: 240 CGEVGVSRQVFDEIVEKDAISWNSMIAVYAQNGLSSEAFEVFHGMI-KYGYVKYNAVTLS 298
Query: 175 SALSACARIAERKVTRGFHGALVKLGLEMETGVGNTLMDAYAKCGVLDVARKVFDEM 5
+ L ACA + + H ++++GL+ VG +L+D Y KCG + +ARK FD M
Sbjct: 299 TLLLACAHSGALQTGKCIHDQVIRMGLDDNVIVGTSLIDMYCKCGRVQMARKTFDGM 355
>ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 116 bits (290), Expect = 2e-24
Identities = 65/123 (52%), Positives = 80/123 (65%), Gaps = 6/123 (4%)
Frame = -1
Query: 355 CHVVDDARKACDDTPVKNVVVWTSMIVGYVWNEAAREALHTFKCFFAEE----GGSDV-- 194
C + DAR D+ P++NVV WTSMI GYV NE A AL FK F EE G++V
Sbjct: 1190 CGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPL 1249
Query: 193 DYVAAVSALSACARIAERKVTRGFHGALVKLGLEMETGVGNTLMDAYAKCGVLDVARKVF 14
D V VS LSAC+R++ + +T G HG +VK G + GVGNTLMDAYAKCG V++KVF
Sbjct: 1250 DSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVF 1309
Query: 13 DEM 5
D M
Sbjct: 1310 DWM 1312
Score = 75.5 bits (184), Expect = 4e-12
Identities = 43/117 (36%), Positives = 63/117 (53%)
Frame = -1
Query: 355 CHVVDDARKACDDTPVKNVVVWTSMIVGYVWNEAAREALHTFKCFFAEEGGSDVDYVAAV 176
C + +AR+ D+ P KNVV WT+MI GY+ N+ EAL FK AE + V
Sbjct: 204 CGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAE--NIFPNEYTMV 261
Query: 175 SALSACARIAERKVTRGFHGALVKLGLEMETGVGNTLMDAYAKCGVLDVARKVFDEM 5
S + AC + + RG H +K +E+ +G L+D Y+KCG + A +VF+ M
Sbjct: 262 SLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETM 318
Score = 59.7 bits (143), Expect = 2e-07
Identities = 34/111 (30%), Positives = 54/111 (48%)
Frame = -1
Query: 337 ARKACDDTPVKNVVVWTSMIVGYVWNEAAREALHTFKCFFAEEGGSDVDYVAAVSALSAC 158
++K D K+ + W SMI Y + + EAL F G + V + L AC
Sbjct: 1305 SKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGM-VRHVGVRYNAVTLSAVLLAC 1363
Query: 157 ARIAERKVTRGFHGALVKLGLEMETGVGNTLMDAYAKCGVLDVARKVFDEM 5
A + + H ++K+ LE VG +++D Y KCG +++A+K FD M
Sbjct: 1364 AHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRM 1414
>ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 116 bits (290), Expect = 2e-24
Identities = 65/123 (52%), Positives = 80/123 (65%), Gaps = 6/123 (4%)
Frame = -1
Query: 355 CHVVDDARKACDDTPVKNVVVWTSMIVGYVWNEAAREALHTFKCFFAEE----GGSDV-- 194
C + DAR D+ P++NVV WTSMI GYV NE A AL FK F EE G++V
Sbjct: 2063 CGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPL 2122
Query: 193 DYVAAVSALSACARIAERKVTRGFHGALVKLGLEMETGVGNTLMDAYAKCGVLDVARKVF 14
D V VS LSAC+R++ + +T G HG +VK G + GVGNTLMDAYAKCG V++KVF
Sbjct: 2123 DSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVF 2182
Query: 13 DEM 5
D M
Sbjct: 2183 DWM 2185
Score = 75.5 bits (184), Expect = 4e-12
Identities = 43/117 (36%), Positives = 63/117 (53%)
Frame = -1
Query: 355 CHVVDDARKACDDTPVKNVVVWTSMIVGYVWNEAAREALHTFKCFFAEEGGSDVDYVAAV 176
C + +AR+ D+ P KNVV WT+MI GY+ N+ EAL FK AE + V
Sbjct: 204 CGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAE--NIFPNEYTMV 261
Query: 175 SALSACARIAERKVTRGFHGALVKLGLEMETGVGNTLMDAYAKCGVLDVARKVFDEM 5
S + AC + + RG H +K +E+ +G L+D Y+KCG + A +VF+ M
Sbjct: 262 SLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETM 318
Score = 59.7 bits (143), Expect = 2e-07
Identities = 34/111 (30%), Positives = 54/111 (48%)
Frame = -1
Query: 337 ARKACDDTPVKNVVVWTSMIVGYVWNEAAREALHTFKCFFAEEGGSDVDYVAAVSALSAC 158
++K D K+ + W SMI Y + + EAL F G + V + L AC
Sbjct: 2178 SKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGM-VRHVGVRYNAVTLSAVLLAC 2236
Query: 157 ARIAERKVTRGFHGALVKLGLEMETGVGNTLMDAYAKCGVLDVARKVFDEM 5
A + + H ++K+ LE VG +++D Y KCG +++A+K FD M
Sbjct: 2237 AHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRM 2287