BLASTX nr result

ID: Dioscorea21_contig00037266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037266
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270476.1| PREDICTED: pentatricopeptide repeat-containi...   140   1e-31
emb|CAN75501.1| hypothetical protein VITISV_034156 [Vitis vinifera]   139   2e-31
ref|XP_004163116.1| PREDICTED: pentatricopeptide repeat-containi...   138   4e-31
ref|XP_004140378.1| PREDICTED: pentatricopeptide repeat-containi...   138   4e-31
ref|XP_002515972.1| pentatricopeptide repeat-containing protein,...   136   2e-30

>ref|XP_002270476.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305-like [Vitis vinifera]
          Length = 539

 Score =  140 bits (352), Expect = 1e-31
 Identities = 66/114 (57%), Positives = 83/114 (72%)
 Frame = -1

Query: 347 STIIRAFSASKNPAHAFSLYNQMLLAGISPDHFSFPFLTKACARLASLPLGTSLHCDIVK 168
           ++IIR FS  KNP  + S++ +ML  G+ PDH ++PF+ KA ARL+ L L  ++HC I K
Sbjct: 81  NSIIRGFSKGKNPNPSVSVFVKMLRFGVCPDHLTYPFIAKAVARLSELRLALAVHCRIAK 140

Query: 167 YGFSSDLFVQNSLIHMYASCRDIVSAREVFDAMCVRNSVSWNTMVDGYAKCGDL 6
            G   D F+ NSLIHMY SC DI SAR+VFD M +RNSVSWN M+DGYAKCGDL
Sbjct: 141 EGLWFDRFIANSLIHMYGSCGDIGSARKVFDEMLIRNSVSWNAMLDGYAKCGDL 194


>emb|CAN75501.1| hypothetical protein VITISV_034156 [Vitis vinifera]
          Length = 532

 Score =  139 bits (351), Expect = 2e-31
 Identities = 66/114 (57%), Positives = 83/114 (72%)
 Frame = -1

Query: 347 STIIRAFSASKNPAHAFSLYNQMLLAGISPDHFSFPFLTKACARLASLPLGTSLHCDIVK 168
           ++IIR FS  KNP  + S++ +ML  G+ PDH ++PF+ KA ARL+ L L  ++HC I K
Sbjct: 74  NSIIRGFSKGKNPNPSVSVFVKMLRFGVCPDHLTYPFVAKAVARLSELRLALAVHCRIAK 133

Query: 167 YGFSSDLFVQNSLIHMYASCRDIVSAREVFDAMCVRNSVSWNTMVDGYAKCGDL 6
            G   D F+ NSLIHMY SC DI SAR+VFD M +RNSVSWN M+DGYAKCGDL
Sbjct: 134 EGLWFDRFIANSLIHMYGSCGDIGSARKVFDEMLIRNSVSWNAMLDGYAKCGDL 187


>ref|XP_004163116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305-like [Cucumis sativus]
          Length = 442

 Score =  138 bits (348), Expect = 4e-31
 Identities = 65/114 (57%), Positives = 87/114 (76%)
 Frame = -1

Query: 347 STIIRAFSASKNPAHAFSLYNQMLLAGISPDHFSFPFLTKACARLASLPLGTSLHCDIVK 168
           +T+IRAFS +KNP  + +++ +ML  G+SPD+ ++PFL KA ++L +  LG ++H  IVK
Sbjct: 82  NTLIRAFSNTKNPNPSITVFIKMLQNGVSPDYLTYPFLVKATSKLLNQELGMAVHVHIVK 141

Query: 167 YGFSSDLFVQNSLIHMYASCRDIVSAREVFDAMCVRNSVSWNTMVDGYAKCGDL 6
            G   D F+QNSLIHMYASCRDI SAR+VFD M  +N V+WN M+DGYAKCGDL
Sbjct: 142 SGHEIDKFIQNSLIHMYASCRDIASARKVFDEMPRKNLVTWNAMLDGYAKCGDL 195


>ref|XP_004140378.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305-like [Cucumis sativus]
          Length = 542

 Score =  138 bits (348), Expect = 4e-31
 Identities = 65/114 (57%), Positives = 87/114 (76%)
 Frame = -1

Query: 347 STIIRAFSASKNPAHAFSLYNQMLLAGISPDHFSFPFLTKACARLASLPLGTSLHCDIVK 168
           +T+IRAFS +KNP  + +++ +ML  G+SPD+ ++PFL KA ++L +  LG ++H  IVK
Sbjct: 82  NTLIRAFSNTKNPNPSITVFIKMLQNGVSPDYLTYPFLVKATSKLLNQELGMAVHVHIVK 141

Query: 167 YGFSSDLFVQNSLIHMYASCRDIVSAREVFDAMCVRNSVSWNTMVDGYAKCGDL 6
            G   D F+QNSLIHMYASCRDI SAR+VFD M  +N V+WN M+DGYAKCGDL
Sbjct: 142 SGHEIDKFIQNSLIHMYASCRDIASARKVFDEMPRKNLVTWNAMLDGYAKCGDL 195


>ref|XP_002515972.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544877|gb|EEF46392.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 546

 Score =  136 bits (343), Expect = 2e-30
 Identities = 65/115 (56%), Positives = 84/115 (73%)
 Frame = -1

Query: 347 STIIRAFSASKNPAHAFSLYNQMLLAGISPDHFSFPFLTKACARLASLPLGTSLHCDIVK 168
           +T+IR +S SKNP  + S++ QML  G+ PD+ ++PFL KA ARL    LG S+H  I+K
Sbjct: 83  NTVIRGYSKSKNPNGSISVFIQMLKVGVFPDYLTYPFLVKASARLLKRELGFSIHAHIIK 142

Query: 167 YGFSSDLFVQNSLIHMYASCRDIVSAREVFDAMCVRNSVSWNTMVDGYAKCGDLV 3
           +GF SD F+ NSL+HMYAS  DI  AR VFD M V+N VSWN+MVDG AKCG++V
Sbjct: 143 HGFESDRFISNSLVHMYASFGDISCARYVFDGMPVKNLVSWNSMVDGSAKCGNMV 197


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