BLASTX nr result

ID: Dioscorea21_contig00037262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037262
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516879.1| helicase, putative [Ricinus communis] gi|223...   306   9e-82
ref|XP_003631977.1| PREDICTED: putative chromatin-remodeling com...   305   2e-81
ref|XP_002275787.1| PREDICTED: putative chromatin-remodeling com...   305   2e-81
ref|XP_002315568.1| chromatin remodeling complex subunit [Populu...   304   6e-81
ref|XP_004160200.1| PREDICTED: LOW QUALITY PROTEIN: putative chr...   303   7e-81

>ref|XP_002516879.1| helicase, putative [Ricinus communis] gi|223543967|gb|EEF45493.1|
           helicase, putative [Ricinus communis]
          Length = 1064

 Score =  306 bits (785), Expect = 9e-82
 Identities = 153/163 (93%), Positives = 159/163 (97%)
 Frame = +1

Query: 1   LLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTEGEDRDASIEAFNQPGS 180
           LLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNT GEDRDASIEAFN+PGS
Sbjct: 498 LLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGEDRDASIEAFNKPGS 557

Query: 181 DKFIFLLSTRAGGLGINLASADVVILYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTE 360
           +KF+FLLSTRAGGLGINLA+ADVVILYDSDWNPQ DLQAQDRAHRIGQKKEVQVFRFCTE
Sbjct: 558 EKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTE 617

Query: 361 YTIEEKVIESAYKKLALDALVIQQGRLSEHKTVNKDELLQMVK 489
           YTIEEKVIE AYKKLALDALVIQQGRL+E KTVNKDELLQMV+
Sbjct: 618 YTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVR 660


>ref|XP_003631977.1| PREDICTED: putative chromatin-remodeling complex ATPase chain
           isoform 2 [Vitis vinifera]
          Length = 1068

 Score =  305 bits (782), Expect = 2e-81
 Identities = 152/163 (93%), Positives = 159/163 (97%)
 Frame = +1

Query: 1   LLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTEGEDRDASIEAFNQPGS 180
           LLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNT GEDRDASI+AFN+PGS
Sbjct: 501 LLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGEDRDASIDAFNKPGS 560

Query: 181 DKFIFLLSTRAGGLGINLASADVVILYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTE 360
           +KF+FLLSTRAGGLGINLA+ADVVILYDSDWNPQ DLQAQDRAHRIGQKKEVQVFRFCTE
Sbjct: 561 EKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTE 620

Query: 361 YTIEEKVIESAYKKLALDALVIQQGRLSEHKTVNKDELLQMVK 489
           YTIEEKVIE AYKKLALDALVIQQGRL+E KTVNKDELLQMV+
Sbjct: 621 YTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVR 663


>ref|XP_002275787.1| PREDICTED: putative chromatin-remodeling complex ATPase chain isoform
            1 [Vitis vinifera] gi|297736902|emb|CBI26103.3| unnamed
            protein product [Vitis vinifera]
          Length = 1080

 Score =  305 bits (782), Expect = 2e-81
 Identities = 152/163 (93%), Positives = 159/163 (97%)
 Frame = +1

Query: 1    LLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTEGEDRDASIEAFNQPGS 180
            LLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNT GEDRDASI+AFN+PGS
Sbjct: 513  LLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGEDRDASIDAFNKPGS 572

Query: 181  DKFIFLLSTRAGGLGINLASADVVILYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTE 360
            +KF+FLLSTRAGGLGINLA+ADVVILYDSDWNPQ DLQAQDRAHRIGQKKEVQVFRFCTE
Sbjct: 573  EKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTE 632

Query: 361  YTIEEKVIESAYKKLALDALVIQQGRLSEHKTVNKDELLQMVK 489
            YTIEEKVIE AYKKLALDALVIQQGRL+E KTVNKDELLQMV+
Sbjct: 633  YTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVR 675


>ref|XP_002315568.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222864608|gb|EEF01739.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1050

 Score =  304 bits (778), Expect = 6e-81
 Identities = 152/163 (93%), Positives = 158/163 (96%)
 Frame = +1

Query: 1   LLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTEGEDRDASIEAFNQPGS 180
           LLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNT GEDRDASI+AFN+PGS
Sbjct: 492 LLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGEDRDASIDAFNKPGS 551

Query: 181 DKFIFLLSTRAGGLGINLASADVVILYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTE 360
           +KF FLLSTRAGGLGINLA+ADVVILYDSDWNPQ DLQAQDRAHRIGQKKEVQVFRFCTE
Sbjct: 552 EKFCFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTE 611

Query: 361 YTIEEKVIESAYKKLALDALVIQQGRLSEHKTVNKDELLQMVK 489
           YTIEEKVIE AYKKLALDALVIQQGRL+E KTVNKDELLQMV+
Sbjct: 612 YTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVR 654


>ref|XP_004160200.1| PREDICTED: LOW QUALITY PROTEIN: putative chromatin-remodeling
           complex ATPase chain-like [Cucumis sativus]
          Length = 1073

 Score =  303 bits (777), Expect = 7e-81
 Identities = 151/163 (92%), Positives = 158/163 (96%)
 Frame = +1

Query: 1   LLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTEGEDRDASIEAFNQPGS 180
           LLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGY YCRIDGNT GEDRDASI+AFN+PGS
Sbjct: 507 LLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYYYCRIDGNTGGEDRDASIDAFNKPGS 566

Query: 181 DKFIFLLSTRAGGLGINLASADVVILYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTE 360
           +KF+FLLSTRAGGLGINLA+ADVVILYDSDWNPQ DLQAQDRAHRIGQKKEVQVFRFCTE
Sbjct: 567 EKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTE 626

Query: 361 YTIEEKVIESAYKKLALDALVIQQGRLSEHKTVNKDELLQMVK 489
           YTIEEKVIE AYKKLALDALVIQQGRL+E KTVNKDELLQMV+
Sbjct: 627 YTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVR 669


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