BLASTX nr result

ID: Dioscorea21_contig00037236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037236
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containi...   151   6e-35
ref|XP_003554900.1| PREDICTED: pentatricopeptide repeat-containi...   138   5e-31
ref|XP_002324074.1| predicted protein [Populus trichocarpa] gi|2...   134   6e-30
ref|XP_003618546.1| Pentatricopeptide repeat-containing protein ...   131   6e-29
ref|XP_002873720.1| pentatricopeptide repeat-containing protein ...   130   1e-28

>ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
           mitochondrial-like [Vitis vinifera]
          Length = 632

 Score =  151 bits (381), Expect = 6e-35
 Identities = 72/119 (60%), Positives = 92/119 (77%)
 Frame = +1

Query: 1   NEVVLGSLLASCALHGKLELGRKPMQELVQLYPDNTEYHVLLSNMFAASQRHTEADDLRM 180
           NEVVLGSLL SC++HGKL+LG   +QELVQL P NTEYH+LLSNM+A + +   A+ LR 
Sbjct: 419 NEVVLGSLLGSCSIHGKLQLGEHLLQELVQLDPQNTEYHILLSNMYALAGKQNRANSLRQ 478

Query: 181 VVKNRGIQKTPGMSFIEINGIVHWFTAGDKTHPQTIEIYTMLGEIVRRLKLAGYTIDAA 357
           V+K RGI+K PGMS I + G VH F+AGDK+HP+T E+Y ML E++ RL+LAGY  + A
Sbjct: 479 VLKKRGIKKVPGMSSIHVGGQVHQFSAGDKSHPRTREVYNMLDEMIPRLRLAGYAPNTA 537


>ref|XP_003554900.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
           mitochondrial-like [Glycine max]
          Length = 629

 Score =  138 bits (347), Expect = 5e-31
 Identities = 67/114 (58%), Positives = 88/114 (77%)
 Frame = +1

Query: 1   NEVVLGSLLASCALHGKLELGRKPMQELVQLYPDNTEYHVLLSNMFAASQRHTEADDLRM 180
           NEVVLGSLL +C  HGKL LG K M+ELVQ+ P NTEYH+LLSNM+A   +  +A+ LR 
Sbjct: 416 NEVVLGSLLGACYAHGKLRLGEKIMRELVQMDPLNTEYHILLSNMYALCGKADKANSLRK 475

Query: 181 VVKNRGIQKTPGMSFIEINGIVHWFTAGDKTHPQTIEIYTMLGEIVRRLKLAGY 342
           V+KNRGI+K PGMS I ++G +H F AGDK+HP+T +IY  L +++ +L+LAGY
Sbjct: 476 VLKNRGIRKVPGMSSIYVDGQLHRFIAGDKSHPRTADIYMKLDDMICKLRLAGY 529


>ref|XP_002324074.1| predicted protein [Populus trichocarpa] gi|222867076|gb|EEF04207.1|
           predicted protein [Populus trichocarpa]
          Length = 636

 Score =  134 bits (338), Expect = 6e-30
 Identities = 63/114 (55%), Positives = 86/114 (75%)
 Frame = +1

Query: 1   NEVVLGSLLASCALHGKLELGRKPMQELVQLYPDNTEYHVLLSNMFAASQRHTEADDLRM 180
           NEVVLGSLL SC  HGKL+LG + +QEL+Q+   NTEYHVLLSNM+    +  +A+ LR 
Sbjct: 423 NEVVLGSLLGSCNAHGKLQLGERILQELIQMDGHNTEYHVLLSNMYVLEGKQDKANSLRQ 482

Query: 181 VVKNRGIQKTPGMSFIEINGIVHWFTAGDKTHPQTIEIYTMLGEIVRRLKLAGY 342
           ++K++GI+K PG+S I + G +H F+AGDK+HP T EIY  L  +++RL+LAGY
Sbjct: 483 ILKSKGIRKVPGVSSIYVGGNIHQFSAGDKSHPLTKEIYHALNNMIQRLRLAGY 536


>ref|XP_003618546.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355493561|gb|AES74764.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 637

 Score =  131 bits (329), Expect = 6e-29
 Identities = 63/114 (55%), Positives = 87/114 (76%)
 Frame = +1

Query: 1   NEVVLGSLLASCALHGKLELGRKPMQELVQLYPDNTEYHVLLSNMFAASQRHTEADDLRM 180
           NEVVLGSL+ SC  HG+L+LG K M++L+++ P NTEYH++LSNM+A S +  +A+ LR 
Sbjct: 424 NEVVLGSLIGSCYAHGRLQLGEKIMRDLLEMDPLNTEYHIVLSNMYALSGKVEKANSLRQ 483

Query: 181 VVKNRGIQKTPGMSFIEINGIVHWFTAGDKTHPQTIEIYTMLGEIVRRLKLAGY 342
           V+K RGI+K PGMS I ++G +H F AGDK+H +T EIY  L E++ RL+ AGY
Sbjct: 484 VLKKRGIKKVPGMSSIYVDGKLHQFIAGDKSHTRTSEIYMKLDEMICRLRSAGY 537


>ref|XP_002873720.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297319557|gb|EFH49979.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 623

 Score =  130 bits (327), Expect = 1e-28
 Identities = 60/117 (51%), Positives = 86/117 (73%)
 Frame = +1

Query: 1   NEVVLGSLLASCALHGKLELGRKPMQELVQLYPDNTEYHVLLSNMFAASQRHTEADDLRM 180
           NEVVLGSLL SC++HGKLE+  +  +EL+Q+ P +TEY +L+SNM+ A  R   AD LR 
Sbjct: 417 NEVVLGSLLGSCSVHGKLEIAERIKRELIQMSPGHTEYQILMSNMYVAEGRSDIADGLRG 476

Query: 181 VVKNRGIQKTPGMSFIEINGIVHWFTAGDKTHPQTIEIYTMLGEIVRRLKLAGYTID 351
            ++NRGI+K PG+S I +N  VH F++GD++HP+T E+Y  L E++ R++ AGY  D
Sbjct: 477 SLRNRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEVYLKLNEVIERIRSAGYVPD 533


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